Martin Vingron
Molecular Biology · 2000–2018
A researcher in the Science corpus: 16 papers; trusts 24 researchers and is trusted by 39 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 128 citations into it; #1,120 of 17,773 by trust here, #775 by citations
- Genetics — 24 citations into it; #510 of 6,854 by trust here, #675 by citations
- Computational Biology & Bioinformatics — 9 citations into it
- Artificial Intelligence — 6 citations into it
- Statistics and Probability — 5 citations into it
Whom Martin Vingron trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Shmuel Pietrokovski
- Mark J. P. Chaisson
- Fritz J. Sedlazeck
- Heng Li
- Eugene W. Myers
- Steven Henikoff
- W. James Kent
- Aric A. Hagberg
- Justin M. Zook
- Miten Jain
Who trusts Martin Vingron overall
- Eugeni Belda
- A. Worden
- Si Quang Le
- Heiko A. Schmidt
- Alexandros Stamatakis
- Bui Quang Minh
- Fran Supek
- Jaime Huerta-Cepas
- H. Yoon
- Andrés Moya
Papers from Martin Vingron's perspective
Ordered by how strongly the researchers Martin Vingron trusts endorse each paper. Same corpus, a different order for every researcher.
- The fragment assembly string graph (ECCB/JBI)
- BLAT--the BLAST-like alignment tool. (Genome Research)
- Mapping and quantifying mammalian transcriptomes by RNA-Seq (Nature Methods)
- The Sequence Alignment/Map format and SAMtools (Bioinform.)
- Phenotypic impact of genomic structural variation: insights from and for human disease (Nature reviews genetics)
- Resolving the complexity of the human genome using single-molecule sequencing (Nature)
- Mapping single molecule sequencing reads using basic local alignment with successive refinement (BLASR): application and theory (BMC Bioinformatics)
- Nanopore sequencing and assembly of a human genome with ultra-long reads (Nature Biotechnology)
- Amino acid substitution matrices from protein blocks.
- Piercing the dark matter: bioinformatics of long-range sequencing and mapping (Nature reviews genetics)
Their papers
- A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome (2008) — 1,338 citations
- IntAct: an open source molecular interaction database (2004) — 1,027 citations
- TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing (2002) — 2,636 citations
- Variance stabilization applied to microarray data calibration and to the quantification of differential expression (2002) — 2,594 citations
- Modeling Amino Acid Replacement (2000) — 320 citations
- Minimum information about a microarray experiment (MIAME)—toward standards for microarray data (2001) — 4,236 citations
- A gene expression map of Arabidopsis thaliana development (2005) — 2,605 citations
- Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels (2012) — 1,459 citations
- Histone modification levels are predictive for gene expression (2010) — 789 citations
- Ontologizer 2.0 - a multifunctional tool for GO term enrichment analysis and data exploration (2008) — 536 citations
- Improved detection of overrepresentation of Gene-Ontology annotations with parent-child analysis (2007) — 360 citations
- Correspondence analysis applied to microarray data (2001) — 359 citations
- Natural similarity measures between position frequency matrices with an application to clustering (2008) — 58 citations
- SVIM: structural variant identification using mapped long reads (2018) — 318 citations
- Formation of new chromatin domains determines pathogenicity of genomic duplications (2016) — 614 citations
- Comprehensive genomic profiles of small cell lung cancer (2015) — 2,050 citations