Justin M. Zook

Molecular Biology · 2012–2022

A researcher in the Science corpus: 10 papers; trusts 1 researcher and is trusted by 2 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 222 citations into it; #16,501 of 17,773 by trust here, #5,914 by citations

Whom Justin M. Zook trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Heng Li

Who trusts Justin M. Zook overall

1. Daniel C. Koboldt
2. William B. Langdon
3. Davide Heller
4. Aleksey V. Zimin
5. Heng Li
6. Sergey Nurk
7. Ryan Poplin
8. Marcel Martin
9. Colby Chiang
10. Steven L. Salzberg

Papers from Justin M. Zook's perspective

Ordered by how strongly the researchers Justin M. Zook trusts endorse each paper. Same corpus, a different order for every researcher.

1. Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM
2. The human genome browser at UCSC.
3. An integrated semiconductor device enabling non-optical genome sequencing (Nature)
4. Real-Time DNA Sequencing from Single Polymerase Molecules (Science)
5. Resolving the complexity of the human genome using single-molecule sequencing (Nature)
6. A universal SNP and small-indel variant caller using deep neural networks
7. RFMix: a discriminative modeling approach for rapid and robust local-ancestry inference. (American Journal of Human Genetics)
8. Assembling large genomes with single-molecule sequencing and locality-sensitive hashing (Nature Biotechnology)
9. Salmon: fast and bias-aware quantification of transcript expression using dual-phase inference
10. karyoploteR: an R/Bioconductor package to plot customizable genomes displaying arbitrary data (bioRxiv)

Their papers

• Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome (2019) — 1,512 citations
• Best Practices for Benchmarking Germline Small Variant Calls in Human Genomes (2019) — 350 citations
• An open resource for accurately benchmarking small variant and reference calls (2019) — 303 citations
• A robust benchmark for detection of germline large deletions and insertions (2020) — 358 citations
• Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes (2020) — 428 citations
• The complete sequence of a human genome (2021) — 2,469 citations
• A draft human pangenome reference (2022) — 882 citations
• Extensive sequencing of seven human genomes to characterize benchmark reference materials (2015) — 739 citations
• Integrating human sequence data sets provides a resource of benchmark SNP and indel genotype calls (2013) — 764 citations
• Assuring the quality of next-generation sequencing in clinical laboratory practice (2012) — 463 citations