Wei Shi
Molecular Biology · Bioinform. · 2011–2018
A researcher in the Science corpus: 8 papers; trusts 36 researchers and is trusted by 33 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 144 citations into it; #889 of 17,773 by trust here, #862 by citations
- Genetics — 36 citations into it; #1,941 of 6,854 by trust here, #949 by citations
- Artificial Intelligence — 18 citations into it; #16,460 of 35,345 by trust here, #16,471 by citations
- Cancer Research — 18 citations into it; #225 of 1,780 by trust here, #621 by citations
- Plant Science — 13 citations into it
- Statistics and Probability — 9 citations into it
- Management Science and Operations Research — 6 citations into it
Whom Wei Shi trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Gordon K. Smyth
- Mark D. Robinson
- Simon Anders
- Yang Liao
- Davis J. McCarthy
- Yunshun Chen
- Thomas J. Hardcastle
- Charity W. Law
- Alicia Oshlack
- Ben Langmead
Who trusts Wei Shi overall
- Yang Liao
- Gordon K. Smyth
- Aaron T. L. Lun
- Yunshun Chen
- Michael I. Love
- Gabriel E. Hoffman
- Tallulah S. Andrews
- Belinda Phipson
- Matthew E. Ritchie
- Charlotte Soneson
Papers from Wei Shi's perspective
Ordered by how strongly the researchers Wei Shi trusts endorse each paper. Same corpus, a different order for every researcher.
- A scaling normalization method for differential expression analysis of RNA-seq data (Genome Biology)
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data (Bioinform.)
- Small-sample estimation of negative binomial dispersion, with applications to SAGE data. (Biostatistics)
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome (Genome Biology)
- Controlling the false discovery rate: a practical and powerful approach to multiple testing
- Detecting differential usage of exons from RNA-seq data (Genome Research)
- Moderated statistical tests for assessing differences in tag abundance (Bioinform.)
- Generalized Linear Models
- A comparison of methods for differential expression analysis of RNA-seq data (BMC Bioinformatics)
- Understanding mechanisms underlying human gene expression variation with RNA sequencing (Nature)
Their papers
- voom: precision weights unlock linear model analysis tools for RNA-seq read counts (2014) — 5,697 citations
- limma powers differential expression analyses for RNA-sequencing and microarray studies (2015) — 34,728 citations
- The Subread aligner: fast, accurate and scalable read mapping by seed-and-vote (2013) — 2,860 citations
- featureCounts: an efficient general purpose program for assigning sequence reads to genomic features (2013) — 23,436 citations
- A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control consortium (2014) — 938 citations
- The R package Rsubread is easier, faster, cheaper and better for alignment and quantification of RNA sequencing reads (2018) — 2,534 citations
- Hobit and Blimp1 instruct a universal transcriptional program of tissue residency in lymphocytes (2016) — 909 citations
- The transcription factors Blimp-1 and IRF4 jointly control the differentiation and function of effector regulatory T cells (2011) — 604 citations