Katharina Jasmin Hoff
Molecular Biology · 2009–2023
A researcher in the Science corpus: 9 papers; trusts 25 researchers and is trusted by 9 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 161 citations into it; #4,490 of 17,773 by trust here, #9,851 by citations
- Genetics — 53 citations into it
- Plant Science — 41 citations into it
- Cancer Research — 6 citations into it
Whom Katharina Jasmin Hoff trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Mario Stanke
- W. James Kent
- Alexandre Lomsadze
- Carson Holt
- Thomas D. Wu
- Thomas D. Wu
- Ian Korf
- Mark Borodovsky
- Mark Yandell
- Tomás Bruna
Who trusts Katharina Jasmin Hoff overall
- Tomás Bruna
- Alexandre Lomsadze
- L. Gabriel
- Paschalia Kapli
- Non Yok
- Mark Borodovsky
- Torsten Thomas
- Mina Rho
- Ziheng Yang
- Anastasis Oulas
Papers from Katharina Jasmin Hoff's perspective
Ordered by how strongly the researchers Katharina Jasmin Hoff trusts endorse each paper. Same corpus, a different order for every researcher.
- BLAT--the BLAST-like alignment tool. (Genome Research)
- Gene finding in novel genomes (BMC Bioinformatics)
- Basic local alignment search tool.
- AUGUSTUS: a web server for gene finding in eukaryotes (Nucleic Acids Res.)
- MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects (BMC Bioinformatics)
- GeneWise and Genomewise. (Genome Research)
- A novel hybrid gene prediction method employing protein multiple sequence alignments (Bioinform.)
- BUSCO Applications from Quality Assessments to Gene Prediction and Phylogenomics (bioRxiv)
- Gene prediction with a hidden Markov model and a new intron submodel (European Conference on Computational Biology)
- BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs (Bioinform.)
Their papers
- Predicting Genes in Single Genomes with AUGUSTUS (2018) — 355 citations
- BRAKER1: Unsupervised RNA-Seq-Based Genome Annotation with GeneMark-ET and AUGUSTUS (2016) — 1,039 citations
- Orphelia: predicting genes in metagenomic sequencing reads (2009) — 143 citations
- BRAKER2: automatic eukaryotic genome annotation with GeneMark-EP+ and AUGUSTUS supported by a protein database (2020) — 1,454 citations
- Whole-Genome Annotation with BRAKER (2019) — 573 citations
- BRAKER3: Fully automated genome annotation using RNA-seq and protein evidence with GeneMark-ETP, AUGUSTUS and TSEBRA (2023) — 587 citations
- TSEBRA: transcript selector for BRAKER (2021) — 294 citations
- This Provisional PDF corresponds to the article as it appeared upon acceptance. Fully formatted PDF and full text (HTML) versions will be made available soon. Finding the missing honey bee genes: lessons learned from a genome upgrade (2014) — 318 citations
- Butterfly genome reveals promiscuous exchange of mimicry adaptations among species (2012) — 1,158 citations