Data mining of metal ion environments present in protein structures.

By Heping Zheng, M. Chruszcz, Piotr Lasota, L. Lebioda, Wladek Minor. Journal of Inorganic Biochemistry, 2008

300 citations recorded by the source corpus.

How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

A New Generation of Crystallographic Validation Tools for the Protein Data Bank (2011, background): “When this is done, it is clear that some components have been misidentified; for example, a study of metal coordination geometry strongly suggests that metal ions have been misidentified in a number of PDB entries (Zheng et al., 2008).”
Metals in protein structures: a review of their principal features (2010, methodology): “(8) shows, for Ca and Mg, that the effect is common in low resolution structures, but not negligible in higher resolution structures.”
Stimulation of lignocellulosic biomass hydrolysis by proteins of glycoside hydrolase family 61: structure and function of a large, enigmatic family. (2010, background): “9 Å with Zn), but both are much longer than the normal distances for coordination (58).”
Structural and immunologic characterization of bovine, horse, and rabbit serum albumins (2012, methodology): “Therefore during the refinement we restrained the ligand distances based on the data in Zheng et al. (Zheng et al., 2008).”