Genome-scale identification of nucleosome positions in S

By Guo-Cheng Yuan, Y. J. Liu, M. Dion, Lf Wu. 2005

339 citations recorded by the source corpus.

View Paper: https://www.semanticscholar.org/paper/b10e72593bd893307f7afac5f0eca5cdc36670da

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Citations in the corpus

Pioneer transcription factors: establishing competence for gene expression. (2011, background): “The pervasiveness of apparent nucleosomefree or nucleosome-destabilized regions at promoters throughout the genome (Yuan et al. 2005; Mavrich et al. 2008) led to the hypothesis that such regions possess sequences that intrinsically destabilize the nucleosome (Segal et al.”
The role of chromatin during transcription. (2007, background): “This region is flanked on both sides by positioned nucleosomes (Yuan et al., 2005).”
Histone variant H2A.Z marks the 5' ends of both active and inactive genes in euchromatin. (2005, background): “Alignment of the microarray data based on the identified NFR of yeast promoters that includes the transcription initiation site (Yuan et al., 2005) revealed that most euchromatic genes contain two positioned H2A.”
High-resolution profiling of histone methylations in the human genome. (2007, background): “The general picture emerging from these studies is that promoter regions of active genes have reduced nucleosome occupancy and elevated histone acetylation (Bernstein et al., 2002, 2004; Lee et al., 2004; Liu et al., 2005; Pokholok et al., 2005; Sekinger et al., 2005; Yuan et al., 2005).”
A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome. (2008, methodology): “The statistical positioning model further predicts that nucleosome fuzziness on individual genes will increase when moving away from a barrier position (Yuan et al. 2005), such as that presented by the +1 nucleosome.”
Dynamic regulation of nucleosome positioning in the human genome. (2008, unknown): “Nucleosome Phasing surrounding TSSs Previous analyses of nucleosome positioning in yeast have suggested that nucleosomes in promoter regions are highly phased (Albert et al., 2007; Yuan et al., 2005).”