Genome Sequence of the Plant Pathogen and Biotechnology Agent Agrobacterium tumefaciens C58

By B. Goodner, Gregory Hinkle, S. Gattung, Nancy Miller, M. Blanchard, Barbara Qurollo, Barry S. Goldman, Yongwei Cao, M. Askenazi, C. Halling and 21 more. Science, 2001

771 citations recorded by the source corpus.

Subfields: Molecular Biology, Plant Science

View Paper: https://www.semanticscholar.org/paper/a1df3a78803b2b27116da3bca2acbeee1f4fb07f

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Citations in the corpus

Enzyme-specific profiles for genome annotation: PRIAM. (2003, background): “meliloti and Ralstonia solanacearum (26), and for the interpretation of S.”
AmpC β-Lactamases (2009, neutral): “diverse bacteria as Agrobacterium tumefaciens (110), Cox-”
Current methods of gene prediction, their strengths and weaknesses. (2002, methodology): “More recent programs such as FrameD (121) and ESTScan (122) are able to deal with noisy sequences and are typically aimed at detecting and correcting frameshifts in cDNA and more speci®cally in EST sequences.”
Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110. (2002, background): “meliloti, the same region is anticipated to be the origin because a shift of GC skew was observed in the region spanning the CC0001 homologue and hemE genes despite of no experimental evidences.(17,18) A cluster of genes containing parA, parB, gidA, gidB, thdF, rho, aroE, dnaQ, and CC3761 homologue ”
Molecular basis of bacterial resistance to chloramphenicol and florfenicol. (2004, background): “The ﬁrst type B cat gene described, catB1 , was cloned from the chromosome of A. tumefaciens [98,99].”
Agrobacterium-Mediated Plant Transformation: the Biology behind the “Gene-Jockeying” Tool (2003, background): “tumefaciens C58 genome (which is composed of a linear and a circular chromosome, a Ti plasmid, and another large plasmid [114, 115, 363]) may provide a starting point for reclassification of Agrobacterium “strains” into true “species.”
ω-Amino Acid:Pyruvate Transaminase from Alcaligenes denitrificans Y2k-2: a New Catalyst for Kinetic Resolution of β-Amino Acids and Amines (2004, neutral): “with 74% identity (16), and the deduced sequence of 155”