Protein pathway and complex clustering of correlated mRNA and protein expression analyses in Saccharomyces cerevisiae
By M. Washburn, A. Koller, G. Oshiro, Ryan R Ulaszek, David M. Plouffe, Cosmin Deciu, Elizabeth A. Winzeler, John R. Yates III. Proceedings of the National Academy of Sciences of the United States of America, 2003
362 citations recorded by the source corpus.
Subfields: Food Science, Molecular Biology
View Paper: https://www.semanticscholar.org/paper/80e7f7e45a94006da0e7270c94c483a887c52e89
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In Molecular Biology
- Arul M. Chinnaiyan
- Debashis Ghosh
- Daniel R. Rhodes
- Mark Gerstein
- Mark A. Rubin
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- Eleftherios P. Diamandis
Citations in the corpus
- Mass Spectrometry as a Diagnostic and a Cancer Biomarker Discovery Tool (2004, result): “In contrast, a recent study using mass spectrometry and isotope labeling succeeded in quantitatively monitoring changes in the abundance of only 688 yeast proteins (58).”
- The Need for Multi-Omics Biomarker Signatures in Precision Medicine (2019, background): “While transcriptomics allows the quantification of the immediate product of a cell’s genome at a particular time (thus ‘measuring’ the direct activity of the genome, or any change thereof under different conditions or during disease development), initial large-scale studies of cellular proteomes sho”
- Interpreting Expression Data with Metabolic Flux Models: Predicting Mycobacterium tuberculosis Mycolic Acid Production (2009, neutral): “There are conflicting reports regarding the correlation between mRNA and protein levels [38], but some whole genome studies have reported modest correlations.”
- Integrative genomic and proteomic analysis of prostate cancer reveals signatures of metastatic progression. (2005, result): “Thus, similar to studies done in yeast (Griffin et al., 2002; Washburn et al., 2003), bacteria (Baliga et al.”
- Comparing protein abundance and mRNA expression levels on a genomic scale (2003, positive): “This method has been extended to comparative protein profiling by using in vivo 14N/15N metabolic labeling [20,21].”
- Correlation of mRNA and protein in complex biological samples (2009, neutral): “The correlation with microarray data from identical samples was reported as weakly positive ( r s = 0.45) [43].”