Specific effects of microRNAs on the plant transcriptome.

By R. Schwab, Javier F. Palatnik, Markus Riester, C. Schommer, M. Schmid, Detlef Weigel. Developmental Cell, 2005

1,467 citations recorded by the source corpus.

Subfields: Cancer Research, Plant Science

View Paper: https://www.semanticscholar.org/paper/64d9fe3cccdd2538d71c44119e6e0100868d572d

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Citations in the corpus

Plant microRNAs: new players in functional genomics (2013, neutral): “Introduction MicroRNAs (miRNAs) are endogenous, small, noncoding RNA molecules playing crucial roles in the regulation of gene expression at the post-transcriptional level in eukaryotes and viruses (Carrington and Ambros 2003; Bartel 2004; Schwab et al. 2005; Unver et al. 2009).”
Specialization and evolution of endogenous small RNA pathways (2007, background): “thaliana MIR159A , MIR159B and MIR159C overlap significantly, and plants that ectopically express members of the miR159 family have similar phenotype”
A two-hit trigger for siRNA biogenesis in plants. (2006, positive): “Cleavage at the PtTAS3 5 0 site demonstrated that some cleavage targets could be missed when using target-prediction guidelines, such as those of Schwab et al. (2005), that forbid mismatches at position 10.”
Functional diversity of miRNA in plants (2007, background): “Meanwhile, the expression level of the target mRNAs is downregulated compared to wild plants, as can be detected by northern blotting method [25–30].”
Sorting of small RNAs into Arabidopsis argonaute complexes is directed by the 5' terminal nucleotide. (2008, positive): “Overexpression of this small RNA recapitulates the phenotypes of try and cpc single or double mutants (Schwab et al., 2005).”
Negative Regulation of Anthocyanin Biosynthesis in Arabidopsis by a miR156-Targeted SPL Transcription Factor[W][OA] (2011, background): “While carefully comparing the inflorescences of wild-type and transgenic plants that have reduced SPL activity because of miR156 overexpression (Pro35S:MIR156) (Schwab et al., 2005), we noticed hyperaccumulation of purple pigments.”
Genetic containment of forest plantations (2007, background): “However, this does not appear to be a common problem in plants for welltargeted dsRNAs, perhaps because both siRNAs and miRNAs require high levels of complementarity with their target (Watson et al. 2005; Schwab et al. 2005).”
The sequential action of miR156 and miR172 regulates developmental timing in Arabidopsis. (2009, positive): “Interestingly, the miR172 target AP2 negatively regulates its own expression (Schwab et al., 2005), and may represent another example of this phenomenon.”
Plant microRNA: a small regulatory molecule with big impact. (2006, background): “However, a recent study observed that miR172 can also efficiently guide cleavage of its target transcripts (Schwab et al., 2005).”
Control of Jasmonate Biosynthesis and Senescence by miR319 Targets (2008, result): “In summary, the similar phenotypes of tcp loss-offunction mutants and miR319 overexpressers confirmed the conclusion from microarray and other analyses, that the TCP genes are the major targets of miR319 [3,8,32].”
The Balance between the MIR164A and CUC2 Genes Controls Leaf Margin Serration in Arabidopsis[W] (2006, background): “The Balance between the MIR164A and CUC2 Genes Controls Leaf Margin Serration in Arabidopsis W Krisztina Nikovics,a Thomas Blein,a Alexis Peaucelle,a Tetsuya Ishida,b,1 Halima Morin,a Mitsuhiro Aida,b and Patrick Laufsa,2 a Laboratoire de Biologie Cellulaire, Institut Jean Pierre Bourgin, Institut N”
Gene silencing in plants using artificial microRNAs and other small RNAs. (2008, background): “An unbiased empirical search for effective miRNA target determinants also defined miRNA positions 2–12 as the region most sensitive to mismatches (Schwab et al., 2005), similar to what has been biochemically determined as the region sufficient for siRNA-mediated target degradation in human cells…”
Highly Specific Gene Silencing by Artificial MicroRNAs in Arabidopsis[W][OA] (2006, methodology): “…different amiRNAs in Arabidopsis thaliana and found that similar parameters of target selection apply as for natural miRNAs and that direct targets of amiRNAs can be accurately predicted using empirically derived determinants of target selection by natural miRNAs (Schwab et al., 2005).”