Functional characteristics of an endophyte community colonizing rice roots as revealed by metagenomic analysis.

By A. Sessitsch, Pablo R Hardoim, J. Döring, A. Weilharter, A. Krause, Tanja Woyke, Birgit Mitter, Lena Hauberg-Lotte, Frauke Friedrich, Monali C. Rahalkar and 7 more. Molecular Plant-Microbe Interactions, 2012

655 citations recorded by the source corpus.

Subfields: Ecology, Plant Science

View Paper: https://www.semanticscholar.org/paper/3739143eb8f48a51aee0c32d677b18cd5c30afa9

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Citations in the corpus

Bacterial endophytes from arid land plants regulate endogenous hormone content and promote growth in crop plants: an example of Sphingomonas sp. and Serratia marcescens (2017, background): “…can be present in the rhizosphere (roots), phylloplane (in leaves), laimosphere caulosphere (in stems), carposphere (in fruits), spermosphere (in seeds), and anthosphere (in flowers) according to Clay and Holah (1999), Lindow and Brandl (2003), Saikkonen et al. (2004), and Sessitsch et al. (2012).”
Structure, variation, and assembly of the root-associated microbiomes of rice (2015, methodology): “Metagenomic and proteomic approaches have been used to identify different microbial genes present in the rice microbiome (17, 18), but an extensive characterization of microbiome composition and variation has not been performed.”
Abiotic Stress Responses and Microbe-Mediated Mitigation in Plants: The Omics Strategies (2017, background): “Metagenomic sequences obtained from endophytic cell extracts revealed that metabolic processes pertaining to the endophytic life style and functional features like quorum sensing and detoxification of ROS have their role in improving plant stress resistance (Sessitsch et al., 2012).”
Advances in Elucidating Beneficial Interactions Between Plants, Soil, and Bacteria (2013, background): “Cultivation-based as well as -independent approaches indicate that as in the rhizosphere, Proteobacteria seems to be the most important phylum among bacterial endophytes, comprising a range of differentAlpha-, Beta-, andGammaproteobacteria (Berg et al., 2005; Sessitsch et al., 2012).”
The plant microbiome (2013, methodology): “Endophytes are thought to be a sub-population of the rhizosphere microbiome [66], but they also have characteristics distinct from rhizospheric bacteria, suggesting that not all rhizospheric bacteria can enter plants, and/or that once inside their hosts they change their metabolism and become adapte”
Bacterial seed endophytes: genera, vertical transmission and interaction with plants (2015, positive): “Recently, also transport proteins for uptake of plant-synthesized nutrients, secretion and delivery systems involved in switching from a free-living to an endophytic life style, transcriptional regulators for metabolic adaptation and quorum sensing, and detoxification mechanisms used in the protecti”
Diverse culturable diazotrophic endophytic bacteria from Poaceae plants show cross-colonization and plant growth promotion in wheat (2017, background): “Most reports on endophytic nitrogen fixing populations are available for rice plants (Prakamhang et al. 2009; Sessitsch et al. 2012; Rangjaroen et al. 2014; Ferrando and Scavino 2015).”
The Hidden World within Plants: Ecological and Evolutionary Considerations for Defining Functioning of Microbial Endophytes (2015, background): “and might also ameliorate host biotic and abiotic stresses by protecting plant cells from oxidative damages (12, 259).”
Biotechnological Applications of Bacterial Endophytes (2014, background): “For more information on endophytic bacteria the reader is referred to references [1, 6, 8, 12, 27, 32, 36, 53-56].”
Biological nitrogen fixation in non-legume plants. (2013, background): “However, it should be noted that recent metagenomic studies revealed a wide range of endophytes that are adapted to proliferate and spread in field-grown plants, although some have not yet been cultured or are difficult to isolate as pure cultures (Ikeda et al., 2010; Sessitsch et al., 2012).”