Genome evolution of wild barley (Hordeum spontaneum) by BARE-1 retrotransposon dynamics in response to sharp microclimatic divergence.

By R. Kalendar, Jaakko Tanskanen, S. Immonen, Eviatar Nevo, A. Schulman. Proceedings of the National Academy of Sciences of the United States of America, 2000

628 citations recorded by the source corpus.

Subfields: Plant Science

View Paper: https://www.semanticscholar.org/paper/0d45620123b47e59080f7ce728d0c208aaf37121

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In Plant Science

1. C. Grover
2. Todd P. Michael
3. R. Kerstetter
4. Wenqin Wang
5. Bao Liu
6. J. Doležel
7. Marcus A. Koch
8. M. Fraga

Citations in the corpus

• Plant transposable elements: where genetics meets genomics (2002, neutral): “presented a striking example of TE-mediated genome restructuring in populations of the wild barley Hordeum spontaneum”
• Plant DNA flow cytometry and estimation of nuclear genome size. (2005, background): “However, differences between C-values of different populations estimated by flow cytometry were not statistically significant and genome size was only weakly associated with microclimatic gradient (Kalendar et al., 2000).”
• Evolution of Genome Size in Duckweeds (Lemnaceae) (2011, background): “For example, the BARE-1 TE is positively correlated with genome size within wild barley (Hordeum spontaneum) in response to sharp microclimatic divergence [42].”
• Recent Insights into Mechanisms of Genome Size Change in Plants (2010, background): “Bursts of transposition are often considered to provide a temporary release from this or related forms of epigenetic suppression, a release suggested to be initiated by environmental stress [53–56] or an organismal process such as interspecific hybridization.”
• Environmental Influence on L1 Retrotransposons in the Adult Hippocampus (2009, background): “In fact, the copy number of the plant BARE-1 retrotransposon correlates with a sharp microclimate divergence, suggesting stress-induced mobilization of retroelements in response to environmental stimuli (Kalendar et al., 2000).”
• Non-coding nuclear DNA markers in phylogenetic reconstruction (2009, background): “These markers were considerably more polymorphic than ISSR, and suitable for DNA fingerprinting (Kalendar et al. 1999, 2000; Manninen et al. 2000; Chang et al. 2001; Leigh et al. 2003; Antonius-Klemola et al. 2006).”
• Non-Mendelian Phenomena in Allopolyploid Genome Evolution (2002, background): “An important demonstration of retrotransposon activation in natural populations was recently described for wild barley (Hordeum spontaneum) from Israel [92].”
• Involvement of DNA methylation in tree development and micropropagation (2007, background): “…as well as to several physiological changes such as pathogen attack, environmental cues, in vitro culture, germination, interspecies introgression, or tissue irradiation (Hirochika et al. 1996; Grandbastien 1998; Kalendar et al. 2000; Maekawa et al. 2003; Liu et al. 2004; de Diego et al. 2006).”
• Transposable elements and the evolution of genome size in eukaryotes (2002, background): “This has recently been dramatically illustrated in wild barley, Hordeum spontaneum, in which the proportion of the genome occupied by the BARE-1 retrotransposon varies in different ecological regions of Evolution Canyon in Israel ( Kalendar et al., 2000 ).”
• The repair of double-strand breaks in plants: mechanisms and consequences for genome evolution. (2004, background): “BARE-1 is active in barley (Kalendar et al., 2000; Vicient et al., 2001) and during their spread retroelements integrate regularly into one another (San Miguel et al., 1996).”