Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing
By P. Shih, Dongying Wu, A. Latifi, S. Axen, D. Fewer, E. Talla, Alexandra Calteau, Fei Cai, N. Tandeau de Marsac, R. Rippka and 13 more. Proceedings of the National Academy of Sciences of the United States of America, 2012
789 citations recorded by the source corpus.
Subfields: Ecology, Molecular Biology, Renewable Energy, Sustainability and the Environment
View Paper: https://www.semanticscholar.org/paper/006b868f1b69ac245b709520642e0e3b807bc4e7
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In Ecology
- Frederick Albert Matsen IV
- Guillaume Jospin
- Aaron E. Darling
- Holly M. Bik
- J. Komárek
- Jonathan A. Eisen
- N. Butterfield
- Jongsik Chun
In Molecular Biology
- Frederick Albert Matsen IV
- Aaron E. Darling
- Guillaume Jospin
- Seok-Hwan Yoon
- Jongsik Chun
- Sung-min Ha
- Holly M. Bik
- Inwoo Baek
In Renewable Energy, Sustainability and the Environment
Citations in the corpus
- PhyloSift: phylogenetic analysis of genomes and metagenomes (2014, background): “Efforts to increase the 572 phylogenetic diversity of available genome sequences are ongoing [63, 48, 53] 573 Advances in the preparation of high throughput samples will make comparative metagenomics more 574 tractable.”
- Proterozoic photosynthesis – a critical review (2015, background): “Simple subsection-III filaments are readily distinguishable from other cyanobacteria on morphological grounds but, once again, represent a polyphyletic grade of organization rather than a phylogenetically coherent clade (Schirrmeister et al. 2011, 2013; Shih et al. 2013).”
- UBCG: Up-to-date bacterial core gene set and pipeline for phylogenomic tree reconstruction (2018, background): “The bacterial core genes are generally defined as the genes that are present in most of the bacterial species (Wu et al., 2009; Rinke et al., 2013; Shih et al., 2013).”
- Species concepts and speciation factors in cyanobacteria, with connection to the problems of diversity and classification (2015, critical): “This suggests convergent or parallel evolutionary events leading to similar phenotypic traits, because it contradicts phylogenomic analyses in Shih et al. (2013).”
- Taxonomic classification of cyanoprokaryotes (cyanobacterial genera) 2014, using a polyphasic approach (2014, methodology): “1, see also Shih et al. 2013).”