J. Hoch

Molecular Biology · 2000–2012

A researcher in the Science corpus: 9 papers; trusts 14 researchers and is trusted by 44 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 60 citations into it; #588 of 17,773 by trust here, #2,484 by citations
• Computational Biology & Bioinformatics — 21 citations into it; #131 of 660 by trust here, #225 by citations
• Genetics — 17 citations into it; #187 of 6,854 by trust here, #513 by citations
• Materials Chemistry — 11 citations into it
• Probabilistic & Bayesian Methods — 8 citations into it
• Artificial Intelligence — 5 citations into it

Whom J. Hoch trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Kim D. Pruitt
2. Robert C. Edgar
3. Sean R. Eddy
4. Martin Weigt
5. Robert A. H. White
6. Frank R. Kschischang
7. Donna R. Maglott
8. H. Szurmant
9. Alexander Schug

Who trusts J. Hoch overall

1. Alexander Schug
2. Ryan R. Cheng
3. H. Szurmant
4. Martin Weigt
5. Bryan Lunt
6. Faruck Morcos
7. Andrea Procaccini
8. P. Kivistik
9. Terence Hwa
10. José N. Onuchic

Papers from J. Hoch's perspective

Ordered by how strongly the researchers J. Hoch trusts endorse each paper. Same corpus, a different order for every researcher.

1. The Pfam protein families database
2. MUSCLE: a multiple sequence alignment method with reduced time and space complexity
3. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.
4. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
5. NCBI Reference Sequences: current status, policy and new initiatives (Nucleic Acids Res.)
6. Biological Sequence Analysis: Probabilistic Models of Proteins and Nucleic Acids
7. Identification of direct residue contacts in protein–protein interaction by message passing
8. Generalized Belief Propagation
9. Profile hidden Markov models
10. RefSeq and LocusLink: NCBI gene-centered resources (Nucleic Acids Res.)

Their papers

• Identification of direct residue contacts in protein–protein interaction by message passing (2009) — 1,014 citations
• Structural basis of histidine kinase autophosphorylation deduced by integrating genomics, molecular dynamics, and mutagenesis (2012) — 143 citations
• Computational modeling of phosphotransfer complexes in two-component signaling. (2010) — 19 citations
• Two-component and phosphorelay signal transduction. (2000) — 821 citations
• Features of protein-protein interactions in two-component signaling deduced from genomic libraries. (2007) — 54 citations
• Inference of direct residue contacts in two-component signaling. (2010) — 45 citations
• Bacillus subtilis and Its Closest Relatives (2002) — 306 citations
• Two-Component Systems, Phosphorelays, and Regulation of Their Activities by Phosphatases (2002) — 94 citations
• Bacillus Subtilis and Its Closest Relatives: From Genes to Cells (2001) — 813 citations