Andrew W. McPherson
Molecular Biology · 2011–2019
A researcher in the Science corpus: 7 papers; trusts 2 researchers and is trusted by 0 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 164 citations into it
Whom Andrew W. McPherson trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
Who trusts Andrew W. McPherson overall
Papers from Andrew W. McPherson's perspective
Ordered by how strongly the researchers Andrew W. McPherson trusts endorse each paper. Same corpus, a different order for every researcher.
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome (Genome Biology)
- Mapping and quantifying mammalian transcriptomes by RNA-Seq (Nature Methods)
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data (Bioinform.)
- Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments (BMC Bioinformatics)
- A scaling normalization method for differential expression analysis of RNA-seq data (Genome Biology)
- Understanding mechanisms underlying human gene expression variation with RNA sequencing (Nature)
- MapSplice: Accurate mapping of RNA-seq reads for splice junction discovery (Nucleic Acids Research)
- Controlling the false discovery rate: a practical and powerful approach to multiple testing
- Fast gapped-read alignment with Bowtie 2
- baySeq: Empirical Bayesian methods for identifying differential expression in sequence count data (BMC Bioinformatics)
Their papers
- deFuse: An Algorithm for Gene Fusion Discovery in Tumor RNA-Seq Data (2011) — 562 citations
- A survey of best practices for RNA-seq data analysis (2016) — 2,568 citations
- The clonal and mutational evolution spectrum of primary triple-negative breast cancers (2012) — 1,975 citations
- Probabilistic cell-type assignment of single-cell RNA-seq for tumor microenvironment profiling (2019) — 317 citations
- Dynamics of genomic clones in breast cancer patient xenografts at single cell resolution (2014) — 608 citations
- TITAN: inference of copy number architectures in clonal cell populations from tumor whole-genome sequence data (2014) — 367 citations
- MHC class II transactivator CIITA is a recurrent gene fusion partner in lymphoid cancers (2011) — 612 citations