Migun Shakya
Molecular Biology · 2017–2019
A researcher in the Science corpus: 2 papers; trusts 11 researchers and is trusted by 0 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 61 citations into it
- Ecology — 25 citations into it
- Genetics — 5 citations into it
Whom Migun Shakya trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Tunca Dogan
- Yuzhen Ye
- Javier Tamames
- Anthony M. Bolger
- Benjamin Buchfink
- Yu Peng
- Eric A. Franzosa
- Fernando Puente-Sánchez
- Marc Lohse
- Chao Xie
Papers from Migun Shakya's perspective
Ordered by how strongly the researchers Migun Shakya trusts endorse each paper. Same corpus, a different order for every researcher.
- BLAT--the BLAST-like alignment tool. (Genome Research)
- Trimmomatic: a flexible trimmer for Illumina sequence data (Bioinform.)
- Velvet: algorithms for de novo short read assembly using de Bruijn graphs.
- metaSPAdes: a new versatile metagenomic assembler.
- MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities (PeerJ)
- Fast and sensitive protein alignment using DIAMOND
- MaxBin 2.0: an automated binning algorithm to recover genomes from multiple metagenomic datasets (Bioinform.)
- Structure, Function and Diversity of the Healthy Human Microbiome (Nature)
- A Parsimony Approach to Biological Pathway Reconstruction/Inference for Genomes and Metagenomes (PLoS Comput. Biol.)
- UniProt: a worldwide hub of protein knowledge
Their papers
- Advances and Challenges in Metatranscriptomic Analysis (2019) — 318 citations
- Hi-C deconvolution of a human gut microbiome yields high-quality draft genomes and reveals plasmid-genome interactions (2017) — 101 citations