J. Spatafora

Molecular Biology · 2001–2016

A researcher in the Science corpus: 17 papers; trusts 11 researchers and is trusted by 2 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 153 citations into it; #17,188 of 17,773 by trust here, #3,562 by citations
• Plant Science — 142 citations into it; #4,352 of 8,232 by trust here, #269 by citations
• Cell Biology — 62 citations into it; #1,856 of 2,073 by trust here, #92 by citations
• Genetics — 45 citations into it
• Ecology, Evolution, Behavior and Systematics — 39 citations into it; #4,180 of 6,648 by trust here, #905 by citations
• Paleontology — 27 citations into it
• Insect Science — 20 citations into it
• Computational Biology & Bioinformatics — 9 citations into it

Whom J. Spatafora trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Alexandros Stamatakis
2. Sean R. Eddy
3. Campbell O. Webb
4. Cédric Notredame
5. Salvador Capella-Gutiérrez
6. A. Schuler
7. Siavash Mirarab
8. Robert C. Edgar
9. Michael P. Cummings

Who trusts J. Spatafora overall

1. K. D. Hyde
2. Arjun Kafle

Papers from J. Spatafora's perspective

Ordered by how strongly the researchers J. Spatafora trusts endorse each paper. Same corpus, a different order for every researcher.

1. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.
2. MRBAYES: Bayesian inference of phylogenetic trees (Bioinform.)
3. Basic local alignment search tool.
4. MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
5. T-Coffee: A novel method for fast and accurate multiple sequence alignment.
6. Insights into the phylogeny and coding potential of microbial dark matter
7. MUSCLE: multiple sequence alignment with high accuracy and high throughput.
8. PAUP* [Phylogenetic Analysis Using Parsimony (and Other Methods)]
9. Glomalean fungi from the Ordovician. (Science)
10. A rapid bootstrap algorithm for the RAxML Web servers. (Systematic Biology)

Their papers

• Evolution of microRNA genes by inverted duplication of target gene sequences in Arabidopsis thaliana (2004) — 631 citations
• Reconstructing the early evolution of Fungi using a six-gene phylogeny (2006) — 1,796 citations
• The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits. (2009) — 658 citations
• The genome of Eucalyptus grandis (2014) — 797 citations
• A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data (2016) — 1,087 citations
• Fungi ahoy! Diversity on marine wooden substrata in the high North (2014) — 106 citations
• The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes (2012) — 1,657 citations
• Fueling the future with fungal genomics (2011) — 241 citations
• The fungi. (2009) — 786 citations
• Phylogenetic classification of Cordyceps and the clavicipitaceous fungi (2007) — 1,033 citations
• A multigene phylogeny of the Dothideomycetes using four nuclear loci (2006) — 277 citations
• Early impacts of forest restoration treatments on the ectomycorrhizal fungal community and fine root biomass in a mixed conifer forest (2005) — 97 citations
• Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits. (2004) — 821 citations
• Clavicipitalean Fungi: evolutionary biology, chemistry, biocontrol and cultural impacts. (2003) — 104 citations
• Microsatellite markers reveal the below ground distribution of genets in two species of Rhizopogon forming tuberculate ectomycorrhizas on Douglas fir (2003) — 96 citations
• A revision of Verticillium sect. Prostrata. II. Phylogenetic analyses of SSU and LSU nuclear rDNA sequences from anamorphs and teleomorphs of the Clavicipitaceae (2001) — 144 citations
• A revision of Verticillium sect. Prostrata. III. Generic classification (2001) — 158 citations