Johannes E. Schindelin

Biophysics · 2003–2017

A researcher in the Science corpus: 11 papers; trusts 12 researchers and is trusted by 23 researchers here, as inferred from the citation graph.

Subfields

• Biophysics — 67 citations into it; #309 of 1,196 by trust here, #31 by citations
• Molecular Biology — 42 citations into it; #13,423 of 17,773 by trust here, #1,719 by citations
• Computer Vision and Pattern Recognition — 32 citations into it; #18,509 of 21,575 by trust here, #2,443 by citations
• Structural Biology — 17 citations into it; #141 of 224 by trust here, #35 by citations
• Computational Biology & Bioinformatics — 14 citations into it
• Media Technology — 10 citations into it
• Neuroscience — 10 citations into it
• Surfaces, Coatings and Films — 5 citations into it

Whom Johannes E. Schindelin trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Stephan Preibisch
2. David G. Lowe
3. Stephan Saalfeld
4. Benjamin Schmid
5. Ignacio Arganda-Carreras
6. Albert Cardona
7. Anne E Carpenter
8. Pavel Tomancak
9. Mark Longair
10. Kevin W. Eliceiri

Who trusts Johannes E. Schindelin overall

1. Curtis T. Rueden
2. Kevin W. Eliceiri
3. Alexandra B. Schroeder
4. Dipanjan Das
5. Yoshinori Aso
6. Zhiyong Cheng
7. Ignacio Arganda-Carreras
8. Ilya Belevich
9. Mark C. Hiner
10. Albert Cardona

Papers from Johannes E. Schindelin's perspective

Ordered by how strongly the researchers Johannes E. Schindelin trusts endorse each paper. Same corpus, a different order for every researcher.

1. Globally optimal stitching of tiled 3D microscopic image acquisitions (Bioinform.)
2. Distinctive Image Features from Scale-Invariant Keypoints
3. Robust wide-baseline stereo from maximally stable extremal regions
4. Snakes: Active contour models
5. A Computational Framework for Ultrastructural Mapping of Neural Circuitry
6. Network anatomy and in vivo physiology of visual cortical neurons (Nature)
7. TrakEM2 Software for Neural Circuit Reconstruction (PLoS ONE)
8. Automated cell lineage tracing in Caenorhabditis elegans. (Proceedings of the National Academy of Sciences of the United States of America)
9. Reconstruct: a free editor for serial section microscopy
10. A whole-genome assembly of Drosophila. (Science)

Their papers

• Fiji - an Open Source platform for biological image analysis (2012) — 60,675 citations
• A new metric for probability distributions (2003) — 1,244 citations
• TrackMate: An open and extensible platform for single-particle tracking. (2017) — 3,057 citations
• Crowdsourcing the creation of image segmentation algorithms for connectomics (2015) — 371 citations
• Trainable Weka Segmentation: a machine learning tool for microscopy pixel classification (2017) — 2,090 citations
• The ImageJ ecosystem: an open platform for biomedical image analysis (2015) — 2,514 citations
• Software for bead-based registration of selective plane illumination microscopy data (2010) — 394 citations
• ImageJ2: ImageJ for the next generation of scientific image data (2017) — 5,351 citations
• OpenSPIM: an open-access light-sheet microscopy platform (2013) — 329 citations
• TrakEM2 Software for Neural Circuit Reconstruction (2012) — 969 citations
• A high-level 3D visualization API for Java and ImageJ (2010) — 546 citations