Søren Michael Karst
Molecular Biology · 2015–2023
A researcher in the Science corpus: 5 papers; trusts 3 researchers and is trusted by 0 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 93 citations into it
- Ecology — 48 citations into it
Whom Søren Michael Karst trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
Papers from Søren Michael Karst's perspective
Ordered by how strongly the researchers Søren Michael Karst trusts endorse each paper. Same corpus, a different order for every researcher.
- ARB: a software environment for sequence data. (Nucleic Acids Research)
- Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms (The ISME Journal)
- UNOISE2: improved error-correction for Illumina 16S and ITS amplicon sequencing (bioRxiv)
- Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities (Applied and Environmental Microbiology)
- Microbial community profiling for human microbiome projects: Tools, techniques, and challenges. (Genome Research)
- ggplot2: Elegant Graphics for Data Analysis
- American Gut: an Open Platform for Citizen Science Microbiome Research (mSystems)
- Ribosomal Database Project: data and tools for high throughput rRNA analysis (Nucleic Acids Res.)
- Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences (Nature Reviews Microbiology)
- rrnDB: improved tools for interpreting rRNA gene abundance in bacteria and archaea and a new foundation for future development (Nucleic Acids Res.)
Their papers
- Greengenes2 unifies microbial data in a single reference tree (2023) — 563 citations
- Oxford Nanopore R10.4 long-read sequencing enables the generation of near-finished bacterial genomes from pure cultures and metagenomes without short-read or reference polishing (2022) — 386 citations
- High-accuracy long-read amplicon sequences using unique molecular identifiers with Nanopore or PacBio sequencing (2021) — 319 citations
- ampvis2: an R package to analyse and visualise 16S rRNA amplicon data (2018) — 585 citations
- MiDAS: the field guide to the microbes of activated sludge (2015) — 295 citations