Mark Diekhans
Molecular Biology · 1999–2022
A researcher in the Science corpus: 33 papers; trusts 15 researchers and is trusted by 26 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 782 citations into it; #1,576 of 17,773 by trust here, #182 by citations
- Genetics — 242 citations into it; #4,012 of 6,854 by trust here, #1,251 by citations
- Plant Science — 194 citations into it
- Computational Biology & Bioinformatics — 54 citations into it
- Cancer Research — 51 citations into it
- Algorithms & Complexity — 7 citations into it
Whom Mark Diekhans trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- W. James Kent
- Stephen F. Altschul
- Kim D. Pruitt
- Ian Korf
- Kevin J. Karplus
- Steven Henikoff
- Tim J. P. Hubbard
- Danielle Thierry-Mieg
- J. Harrow
- Webb Miller
Who trusts Mark Diekhans overall
- Thomas G. Dietterich
- Christina S. Leslie
- Li Liao
- William Stafford Noble
- L. V. D. van der Maaten
- Thomas Gärtner
- Jason Aaron Edward Weston
- Eleazar Eskin
- Chen Sun
- Chris H. Q. Ding
Papers from Mark Diekhans's perspective
Ordered by how strongly the researchers Mark Diekhans trusts endorse each paper. Same corpus, a different order for every researcher.
- Basic local alignment search tool.
- Human-mouse alignments with BLASTZ. (Genome Research)
- BLAT--the BLAST-like alignment tool. (Genome Research)
- NCBI Reference Sequences: current status, policy and new initiatives (Nucleic Acids Res.)
- DNA methylation patterns and epigenetic memory.
- Transcriptional regulatory elements in the human genome. (Annual review of genomics and human genetics (Print))
- FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin. (Genome Research)
- Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome (Nature Genetics)
- Control of developmental regulators by Polycomb in human embryonic stem cells. (Cell)
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
Their papers
- GENCODE: The reference human genome annotation for The ENCODE Project (2012) — 4,487 citations
- The UCSC Genome Browser Database (2003) — 2,234 citations
- The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes. (2009) — 586 citations
- The UCSC Genome Browser Database: update 2009 (2008) — 679 citations
- The UCSC Genome Browser database: 2015 update (2014) — 993 citations
- The UCSC Genome Browser Database: 2008 update (2007) — 560 citations
- The UCSC Genome Browser database: 2014 update (2013) — 915 citations
- The UCSC Genome Browser database: update 2011 (2010) — 1,944 citations
- The UCSC Genome Browser database: update 2010 (2009) — 1,401 citations
- Assemblathon 1: a competitive assessment of de novo short read assembly methods. (2011) — 544 citations
- The UCSC Genome Browser database: extensions and updates 2013 (2012) — 1,030 citations
- A Discriminative Framework for Detecting Remote Protein Homologies (2000) — 578 citations
- Using native and syntenically mapped cDNA alignments to improve de novo gene finding (2008) — 2,184 citations
- ENCODE Data in the UCSC Genome Browser: year 5 update (2012) — 814 citations
- Initial sequencing and comparative analysis of the mouse genome. (2002) — 4,291 citations
- Towards complete and error-free genome assemblies of all vertebrate species (2020) — 2,673 citations
- The UCSC Genome Browser database: extensions and updates 2011 (2011) — 406 citations
- 28-way vertebrate alignment and conservation track in the UCSC Genome Browser. (2007) — 303 citations
- The GENCODE pseudogene resource (2012) — 344 citations
- Progressive Cactus is a multiple-genome aligner for the thousand-genome era (2020) — 445 citations