Mark Stitt
Molecular Biology · 2000–2019
A researcher in the Science corpus: 26 papers; trusts 18 researchers and is trusted by 24 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 209 citations into it; #2,788 of 17,773 by trust here, #1,669 by citations
- Plant Science — 148 citations into it; #733 of 8,232 by trust here, #458 by citations
- Spectroscopy — 9 citations into it
Whom Mark Stitt trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- M. W. Pfaffl
- Benjamin M. Bolstad
- W. Scheible
- Tomasz Czechowski
- Alison M. Smith
- Rafael A. Irizarry
- Jan Ruijter
- A. Brunner
- M. Curtis
- Björn Usadel
Who trusts Mark Stitt overall
- François Tardieu
- C. Körner
- B. Miflin
- Michaela Hundertmark
- Henrik Hartmann
- I. Tetlow
- Alison M. Smith
- W. Scheible
- Maria Greco
- Bikram Datt Pant
Papers from Mark Stitt's perspective
Ordered by how strongly the researchers Mark Stitt trusts endorse each paper. Same corpus, a different order for every researcher.
- A comparison of normalization methods for high density oligonucleotide array data based on variance and bias (Bioinform.)
- MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes. (The Plant Journal)
- Controlling the false discovery rate: a practical and powerful approach to multiple testing
- Basic local alignment search tool.
- Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems. (Journal of Molecular Endocrinology)
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
- Plant Circadian Clocks Increase Photosynthesis, Growth, Survival, and Competitive Advantage (Science)
- Exploration, normalization, and summaries of high density oligonucleotide array probe level data. (Biostatistics)
- Microarray Analysis of the Nitrate Response in Arabidopsis Roots and Shoots Reveals over 1,000 Rapidly Responding Genes and New Linkages to Glucose, Trehalose-6-Phosphate, Iron, and Sulfate… (Plant Physiology)
- Chloroplast-derived photo-oxidative stress causes changes in H2O2 and EGSH in other subcellular compartments (bioRxiv)
Their papers
- MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes. (2004) — 3,246 citations
- PageMan: An interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments (2006) — 360 citations
- RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics (2012) — 823 citations
- GMD@CSB.DB: the Golm Metabolome Database (2005) — 1,297 citations
- Genome-Wide Identification and Testing of Superior Reference Genes for Transcript Normalization in Arabidopsis1[w] (2005) — 1,665 citations
- Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: unprecedented sensitivity reveals novel root- and shoot-specific genes. (2004) — 642 citations
- Extension of the Visualization Tool MapMan to Allow Statistical Analysis of Arrays, Display of Coresponding Genes, and Comparison with Known Responses1 (2005) — 611 citations
- An evaluation of direct and indirect mechanisms for the “sink-regulation” of photosynthesis in spinach: Changes in gas exchange, carbohydrates, metabolites, enzyme activities and steady-state transcript levels after cold-girdling source leaves (2004) — 290 citations
- Coordination of carbon supply and plant growth. (2007) — 1,028 citations
- A guide to using MapMan to visualize and compare Omics data in plants: a case study in the crop species, Maize. (2009) — 534 citations
- Mercator: a fast and simple web server for genome scale functional annotation of plant sequence data. (2014) — 537 citations
- Reciprocal diurnal changes of phosphoenolpyruvate carboxylase expression and cytosolic pyruvate kinase, citrate synthase and NADP‐isocitrate dehydrogenase expression regulate organic acid metabolism during nitrate assimilation in tobacco leaves (2000) — 191 citations
- Metabolic and signaling aspects underpinning the regulation of plant carbon nitrogen interactions. (2010) — 800 citations
- Nitrate Reduction and signalling (2001) — 113 citations
- Sugar-induced increases in trehalose 6-phosphate are correlated with redox activation of ADPglucose pyrophosphorylase and higher rates of starch synthesis in Arabidopsis thaliana. (2006) — 614 citations
- Metabolic control analysis and regulation of the conversion of sucrose to starch in growing potato tubers (2004) — 144 citations
- MapMan4: A Refined Protein Classification and Annotation Framework Applicable to Multi-Omics Data Analysis. (2019) — 402 citations
- Regulation of Flowering by Trehalose-6-Phosphate Signaling in Arabidopsis thaliana (2013) — 677 citations
- Starch turnover: pathways, regulation and role in growth. (2012) — 703 citations
- The interdependence of mechanisms underlying climate-driven vegetation mortality. (2011) — 1,000 citations