Malachi Griffith
Genetics · 2004–2023
A researcher in the Science corpus: 16 papers; trusts 1 researcher and is trusted by 0 researchers here, as inferred from the citation graph.
Subfields
- Genetics — 50 citations into it
Whom Malachi Griffith trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
Papers from Malachi Griffith's perspective
Ordered by how strongly the researchers Malachi Griffith trusts endorse each paper. Same corpus, a different order for every researcher.
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome (Genome Biology)
- Supervised risk predictor of breast cancer based on intrinsic subtypes.
- COSMIC: somatic cancer genetics at high-resolution (Nucleic Acids Res.)
- A CENSUS OF HUMAN CANCER GENES (Nature Reviews. Cancer)
- PubChem: Integrated Platform of Small Molecules and Biological Activities
- Somatic mutations affect key pathways in lung adenocarcinoma (Nature)
- The Sequence Alignment/Map format and SAMtools (Bioinform.)
- Tumour evolution inferred by single-cell sequencing (Nature)
- Clonal evolution in relapsed acute myeloid leukemia revealed by whole genome sequencing (Nature)
- Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets.
Their papers
- De novo assembly and analysis of RNA-seq data (2010) — 993 citations
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (2004) — 602 citations
- Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells. (2008) — 1,160 citations
- deFuse: An Algorithm for Gene Fusion Discovery in Tumor RNA-Seq Data (2011) — 562 citations
- Frequent mutation of histone modifying genes in non-Hodgkin lymphoma (2011) — 1,628 citations
- DGIdb - Mining the druggable genome (2013) — 505 citations
- The clonal and mutational evolution spectrum of primary triple-negative breast cancers (2012) — 1,975 citations
- DGIdb 2.0: mining clinically relevant drug–gene interactions (2015) — 394 citations
- pVAC-Seq: A genome-guided in silico approach to identifying tumor neoantigens (2016) — 392 citations
- SciClone: Inferring Clonal Architecture and Tracking the Spatial and Temporal Patterns of Tumor Evolution (2014) — 443 citations
- DGIdb 3.0: a redesign and expansion of the drug–gene interaction database (2017) — 790 citations
- CIViC is a community knowledgebase for expert crowdsourcing the clinical interpretation of variants in cancer (2017) — 582 citations
- Mitelman Database (Chromosome Aberrations and Gene Fusions in Cancer) (2014) — 477 citations
- DGIdb 5.0: rebuilding the drug–gene interaction database for precision medicine and drug discovery platforms (2023) — 395 citations
- Integration of the Drug–Gene Interaction Database (DGIdb 4.0) with open crowdsource efforts (2020) — 862 citations
- COSMIC (Catalogue of Somatic Mutations in Cancer) (2014) — 1,094 citations