Sarel Jacob Fleishman
Molecular Biology · 2004–2021
A researcher in the Science corpus: 16 papers; trusts 19 researchers and is trusted by 17 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 223 citations into it; #2,731 of 17,773 by trust here, #813 by citations
- Materials Chemistry — 101 citations into it; #11,173 of 11,513 by trust here, #4,843 by citations
- Computational Biology & Bioinformatics — 54 citations into it
- Radiology, Nuclear Medicine and Imaging — 40 citations into it; #1,548 of 3,265 by trust here, #305 by citations
- Computational Chemistry & Drug Discovery — 24 citations into it
- Spectroscopy — 11 citations into it
- Organic Chemistry — 9 citations into it
Whom Sarel Jacob Fleishman trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- David Baker
- Tanja Kortemme
- Brian Kuhlman
- W. Sheffler
- Justin Ashworth
- Lin Jiang
- Colin A. Smith
- Daniel J. Mandell
- Rhiju Das
- Michael D. Tyka
Who trusts Sarel Jacob Fleishman overall
- Joël Janin
- I. Samish
- Torsten Schwede
- Marc F. Lensink
- Christoffer H Norn
- Jens Meiler
- D. Listov
- Douglas M. Fowler
- Amelie Stein
- Vikram Khipple Mulligan
Papers from Sarel Jacob Fleishman's perspective
Ordered by how strongly the researchers Sarel Jacob Fleishman trusts endorse each paper. Same corpus, a different order for every researcher.
- Native protein sequences are close to optimal for their structures.
- Alternate states of proteins revealed by detailed energy landscape mapping
- Computational redesign of protein-protein interaction specificity (Nature Structural &Molecular Biology)
- Kemp elimination catalysts by computational enzyme design
- A simple physical model for binding energy hot spots in protein–protein complexes
- Exploring protein native states and large‐scale conformational changes with a modified generalized born model (Proteins: Structure, Function, and Bioinformatics)
- RosettaHoles: Rapid assessment of protein core packing for structure prediction, refinement, design, and validation
- Algorithms for minimization without derivatives
- A large scale test of computational protein design: folding and stability of nine completely redesigned globular proteins.
- Tertiary templates for proteins. Use of packing criteria in the enumeration of allowed sequences for different structural classes.
Their papers
- Rosetta3: An Object-Oriented Software Suite for the Simulation and Design of Macromolecules (2011) — 1,780 citations
- RosettaScripts: A Scripting Language Interface to the Rosetta Macromolecular Modeling Suite (2011) — 614 citations
- Computational design of proteins targeting the conserved stem region of influenza hemagglutinin (2011) — 600 citations
- Optimization of affinity, specificity and function of designed influenza inhibitors using deep sequencing (2012) — 387 citations
- High Resolution Mapping of Protein Sequence–Function Relationships (2010) — 543 citations
- AbDesign: an algorithm for combinatorial backbone design guided by natural conformations and sequences (2015) — 118 citations
- Computational design of a protein-based enzyme inhibitor. (2013) — 92 citations
- Emerging themes in the computational design of novel enzymes and protein–protein interfaces (2013) — 53 citations
- Principles for computational design of binding antibodies (2017) — 136 citations
- Assessing and enhancing foldability in designed proteins (2021) — 17 citations
- Highly active enzymes by automated combinatorial backbone assembly and sequence design (2018) — 47 citations
- A Cα model for the transmembrane α helices of gap junction intercellular channels (2004) — 101 citations
- High-accuracy modeling of antibody structures by a search for minimum-energy recombination of backbone fragments (2016) — 25 citations
- AbPredict 2: A server for accurate and unstrained structure prediction of antibody variable domains (2018) — 24 citations
- Community‐wide evaluation of methods for predicting the effect of mutations on protein–protein interactions (2013) — 102 citations
- Co-evolving residues in membrane proteins (2007) — 75 citations