Wataru Shinoda

Atomic and Molecular Physics, and Optics · 2004–2008

A researcher in the Science corpus: 3 papers; trusts 3 researchers and is trusted by 0 researchers here, as inferred from the citation graph.

Subfields

• Atomic and Molecular Physics, and Optics — 8 citations into it
• Molecular Biology — 8 citations into it

Whom Wataru Shinoda trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Sanghyun Park
2. Klaus Schulten
3. W. L. Jorgensen
4. John C. Shelley
5. Gregory A. Voth
6. Alexander D. MacKerell
7. Siewert-Jan Marrink

Who trusts Wataru Shinoda overall

1. Ao Zhou
2. Lik-ho Tam

Papers from Wataru Shinoda's perspective

Ordered by how strongly the researchers Wataru Shinoda trusts endorse each paper. Same corpus, a different order for every researcher.

1. VMD: visual molecular dynamics.
2. A unified formulation of the constant temperature molecular dynamics methods
3. Coarse grained model for semiquantitative lipid simulations
4. A Coarse Grain Model for Phospholipid Simulations
5. Calculating potentials of mean force from steered molecular dynamics simulations. (Journal of Chemical Physics)
6. Glide: a new approach for rapid, accurate docking and scoring. 1. Method and assessment of docking accuracy.
7. Molecular mechanisms of photosynthesis
8. Charge and Energy Transfer Dynamics in Molecular Systems: A Theoretical Introduction
9. CHARMM‐GUI: A web‐based graphical user interface for CHARMM
10. Scalable Algorithms for Molecular Dynamics Simulations on Commodity Clusters (International Conference on Software Composition)

Their papers

• Coarse-grained molecular modeling of non-ionic surfactant self-assembly (2008) — 231 citations
• Multi-property fitting and parameterization of a coarse grained model for aqueous surfactants (2007) — 430 citations
• Rapid estimation of elastic constants by molecular dynamics simulation under constant stress (2004) — 995 citations