Xun Xu

Molecular Biology · Nature Genetics · 2010–2020

A researcher in the Science corpus: 31 papers; trusts 1 researcher and is trusted by 0 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 603 citations into it

Whom Xun Xu trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. W. James Kent
2. Mario Stanke
3. Stephen F. Altschul
4. Nick Patterson
5. Prateek Kumar
6. Ewan Birney
7. Zemin Ning

Who trusts Xun Xu overall

1. Xuehui Huang
2. Bin Han

Papers from Xun Xu's perspective

Ordered by how strongly the researchers Xun Xu trusts endorse each paper. Same corpus, a different order for every researcher.

1. Basic local alignment search tool.
2. Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm
3. Velvet: algorithms for de novo short read assembly using de Bruijn graphs.
4. SSAHA: a fast search method for large DNA databases. (Genome Research)
5. Widespread Paleopolyploidy in Model Plant Species Inferred from Age Distributions of Duplicate Genes (The Plant Cell Online)
6. A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica) (Science)
7. An efficient algorithm for large-scale detection of protein families. (Nucleic Acids Research)
8. OrthoMCL: identification of ortholog groups for eukaryotic genomes. (Genome Research)
9. EMBOSS: the European Molecular Biology Open Software Suite.
10. Versatile and open software for comparing large genomes (Genome Biology)

Their papers

• SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads (2013) — 863 citations
• Dynamics and Stabilization of the Human Gut Microbiome during the First Year of Life. (2015) — 2,100 citations
• Earth BioGenome Project: Sequencing life for the future of life (2018) — 813 citations
• Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes (2011) — 799 citations
• The Brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes (2014) — 1,020 citations
• The gut microbiome in atherosclerotic cardiovascular disease (2017) — 1,375 citations
• Altitude adaptation in Tibet caused by introgression of Denisovan-like DNA (2014) — 962 citations
• Single-Cell Exome Sequencing Reveals Single-Nucleotide Mutation Characteristics of a Kidney Tumor (2012) — 666 citations
• The tomato genome sequence provides insights into fleshy fruit evolution (2012) — 2,967 citations
• The genome of the mesopolyploid crop species Brassica rapa (2011) — 1,958 citations
• Genome sequence of foxtail millet (Setaria italica) provides insights into grass evolution and biofuel potential (2012) — 654 citations
• The genome of the pear (Pyrus bretschneideri Rehd.) (2013) — 932 citations
• TGS-GapCloser: A fast and accurate gap closer for large genomes with low coverage of error-prone long reads (2020) — 427 citations
• An atlas of the protein-coding genes in the human, pig, and mouse brain (2020) — 966 citations
• Single-cell landscape of the ecosystem in early-relapse hepatocellular carcinoma. (2020) — 713 citations
• One thousand plant transcriptomes and the phylogenomics of green plants (2019) — 1,332 citations
• Genomic Analyses from Non-invasive Prenatal Testing Reveal Genetic Associations, Patterns of Viral Infections, and Chinese Population History. (2018) — 262 citations
• The microbiota continuum along the female reproductive tract and its relation to uterine-related diseases (2017) — 853 citations
• Draft genome of the living fossil Ginkgo biloba (2016) — 248 citations
• Additional file 5: Figure S15â S17. of The Sinocyclocheilus cavefish genome provides insights into cave adaptation (2016) — 203 citations