Mario S. Valdés-Tresanco

Molecular Biology · 2020–2021

A researcher in the Science corpus: 2 papers; trusts 1 researcher and is trusted by 0 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 20 citations into it
• Computational Theory and Mathematics — 12 citations into it
• Materials Chemistry — 8 citations into it

Whom Mario S. Valdés-Tresanco trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Arthur J. Olson
2. Todd J. Dolinsky
3. Garrett M. Morris
4. Jens Erik Nielsen

Papers from Mario S. Valdés-Tresanco's perspective

Ordered by how strongly the researchers Mario S. Valdés-Tresanco trusts endorse each paper. Same corpus, a different order for every researcher.

1. AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility
2. PDB2PQR: an automated pipeline for the setup of Poisson-Boltzmann electrostatics calculations
3. AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization and multithreading
4. The PyMOL Molecular Graphics System
5. RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy
6. Small-molecule library screening by docking with PyRx. (Methods in molecular biology)
7. The Protein Data Bank
8. Learning Python
9. Protein data bank
10. Computational drug design accommodating receptor flexibility: the relaxed complex scheme. (Journal of the American Chemical Society)

Their papers

• gmx_MMPBSA: A New Tool to Perform End-State Free Energy Calculations with GROMACS. (2021) — 2,775 citations
• AMDock: a versatile graphical tool for assisting molecular docking with Autodock Vina and Autodock4 (2020) — 345 citations