Janusz M. Bujnicki
Molecular Biology · 2000–2023
A researcher in the Science corpus: 21 papers; trusts 93 researchers and is trusted by 36 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 259 citations into it; #1,020 of 17,773 by trust here, #2,067 by citations
- Materials Chemistry — 93 citations into it; #1,369 of 11,513 by trust here, #8,063 by citations
- Computational Biology & Bioinformatics — 61 citations into it
- Evaluation & Benchmarks — 13 citations into it
- Spectroscopy — 13 citations into it
- Computational Theory and Mathematics — 5 citations into it; #4,909 of 12,182 by trust here, #3,218 by citations
Whom Janusz M. Bujnicki trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Johannes Söding
- Liisa Holm
- Björn Wallner
- Marc-André Parisien
- Stephen F. Altschul
- David C. Jones
- Andriy Kryshtafovych
- Andrej Sali
- Arne Elofsson
- Manfred J. Sippl
Who trusts Janusz M. Bujnicki overall
- Sheng Wang
- Björn Wallner
- David T. Jones
- Arne Elofsson
- Marcin Pawlowski
- Fanchi Meng
- G. Bunkoczi
- Zhichao Miao
- Debswapna Bhattacharya
- Jinbo Xu
Papers from Janusz M. Bujnicki's perspective
Ordered by how strongly the researchers Janusz M. Bujnicki trusts endorse each paper. Same corpus, a different order for every researcher.
- The Protein Data Bank.
- Basic local alignment search tool.
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
- Hidden Markov models for detecting remote protein homologies
- Identification of common molecular subsequences.
- Comparative protein modelling by satisfaction of spatial restraints.
- Protein structure comparison by alignment of distance matrices.
- 3D-Jury: A Simple Approach to Improve Protein Structure Predictions (Bioinform.)
- Processing and analysis of CASP3 protein structure predictions
- The Protein Data Bank
Their papers
- Pcons: A neural‐network–based consensus predictor that improves fold recognition (2001) — 326 citations
- MetaDisorder: a meta-server for the prediction of intrinsic disorder in proteins (2012) — 334 citations
- RNA-Puzzles toolkit: a computational resource of RNA 3D structure benchmark datasets, structure manipulation, and evaluation tools (2019) — 76 citations
- ClaRNA: a classifier of contacts in RNA 3D structures based on a comparative analysis of various classification schemes (2014) — 48 citations
- GeneSilico protein structure prediction meta-server (2003) — 420 citations
- The utility of comparative models and the local model quality for protein crystal structure determination by Molecular Replacement (2012) — 8 citations
- RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures (2015) — 197 citations
- Comparison of Protein Structures Reveals Monophyletic Origin of the AdoMet-Dependent Methyltransferase Family and Mechanistic Convergence Rather than Recent Differentiation of N4-Cytosine and N6-Adenine DNA Methylation (2000) — 71 citations
- RNA-Puzzles Round IV: 3D structure predictions of four ribozymes and two aptamers (2020) — 141 citations
- ModeRNA: a tool for comparative modeling of RNA 3D structure (2011) — 274 citations
- RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme (2017) — 197 citations
- SimRNA: a coarse-grained method for RNA folding simulations and 3D structure prediction (2015) — 403 citations
- MODOMICS: a database of RNA modification pathways—2013 update (2012) — 998 citations
- GDFuzz3D: a method for protein 3D structure reconstruction from contact maps, based on a non-Euclidean distance function (2015) — 44 citations
- RNAcentral: a hub of information for non-coding RNA sequences (2018) — 303 citations
- MODOMICS: a database of RNA modification pathways (2005) — 1,188 citations
- MODOMICS: a database of RNA modification pathways. 2008 update (2008) — 1,116 citations
- RNA target highlights in CASP15: Evaluation of predicted models by structure providers (2023) — 38 citations
- MODOMICS: a database of RNA modifications and related information. 2023 update (2023) — 332 citations
- Faculty Opinions recommendation of Sampling Native-like Structures of RNA-Protein Complexes through Rosetta Folding and Docking. (2019) — 6 citations