I. Holmes
Molecular Biology · Nature · 2007–2022
A researcher in the Science corpus: 6 papers; trusts 16 researchers and is trusted by 3 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 135 citations into it; #12,098 of 17,773 by trust here, #1,669 by citations
- Ecology — 14 citations into it
- Evaluation & Benchmarks — 5 citations into it
Whom I. Holmes trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Radford M. Neal
- David John Cameron MacKay
- A. Ramette
- Christopher Quince
- Patrick D. Schloss
- Andy Liaw
- Dan Knights
- Qiong Wang
- Anders Lanzén
- Jo Handelsman
Who trusts I. Holmes overall
- John Bunge
- Andrew D. Fernandes
- Sophie J. Weiss
- M. Matchado
- Patricio S. La Rosa
- A. Willis
- Zhenjiang Xu
- Jean M. Macklaim
- J. N. Reid
- Michael Lauber
Papers from I. Holmes's perspective
Ordered by how strongly the researchers I. Holmes trusts endorse each paper. Same corpus, a different order for every researcher.
- Introducing DOTUR, a Computer Program for Defining Operational Taxonomic Units and Estimating Species Richness (Applied and Environmental Microbiology)
- Microbial diversity in the deep sea and the underexplored “rare biosphere” (Proceedings of the National Academy of Sciences of the United States of America)
- QIIME allows analysis of high-throughput community sequencing data (Nature Methods)
- Accurate determination of microbial diversity from 454 pyrosequencing data (Nature Methods)
- Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB (Applied and Environmental Microbiology)
- Microbial Population Structures in the Deep Marine Biosphere (Science)
- Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex (Nature Methods)
- Pattern Recognition and Machine Learning
- Genome sequencing in microfabricated high-density picolitre reactors (Nature)
- Naïve Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy (Applied and Environmental Microbiology)
Their papers
- Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project (2007) — 5,374 citations
- Fast Statistical Alignment (2009) — 361 citations
- Dirichlet Multinomial Mixtures: Generative Models for Microbial Metagenomics (2012) — 805 citations
- JBrowse: a next-generation genome browser. (2009) — 700 citations
- JBrowse: a dynamic web platform for genome visualization and analysis (2016) — 681 citations
- JBrowse 2: a modular genome browser with views of synteny and structural variation (2022) — 775 citations