Dan Knights

Molecular Biology · 2010–2021

A researcher in the Science corpus: 28 papers; trusts 24 researchers and is trusted by 22 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 443 citations into it; #2,102 of 17,773 by trust here, #49 by citations
• Ecology — 154 citations into it; #8,861 of 10,717 by trust here, #53 by citations
• Physiology — 72 citations into it; #1,839 of 2,276 by trust here, #28 by citations
• Artificial Intelligence — 25 citations into it
• Statistics and Probability — 20 citations into it
• Clinical Biochemistry — 11 citations into it
• Dermatology — 9 citations into it
• Evaluation & Benchmarks — 9 citations into it

Whom Dan Knights trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Catherine A. Lozupone
2. Trevor J. Hastie
3. Noah Fierer
4. Rob Knight
5. Micah Hamady
6. C. Lauber
7. Andy Liaw
8. Hui Zou
9. Jerome H. Friedman
10. Robert Tibshirani

Who trusts Dan Knights overall

1. L. Ursell
2. I. Holmes
3. Molly K. Gibson
4. Julia Goodrich
5. Rob Knight
6. Kjersti Aagaard
7. Alexander R. Statnikov
8. David Arndt
9. Kevin J. Forsberg
10. J. Metcalf

Papers from Dan Knights's perspective

Ordered by how strongly the researchers Dan Knights trusts endorse each paper. Same corpus, a different order for every researcher.

1. Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB (Applied and Environmental Microbiology)
2. UniFrac: a New Phylogenetic Method for Comparing Microbial Communities (Applied and Environmental Microbiology)
3. Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale (Applied and Environmental Microbiology)
4. Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex (Nature Methods)
5. Fast UniFrac: Facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data (The ISME Journal)
6. Toward an ecological classification of soil bacteria. (Ecology)
7. rRNA Operon Copy Number Reflects Ecological Strategies of Bacteria (Applied and Environmental Microbiology)
8. The influence of sex, handedness, and washing on the diversity of hand surface bacteria (Proceedings of the National Academy of Sciences of the United States of America)
9. Addendum: Regularization and variable selection via the elastic net
10. Evolution of Mammals and Their Gut Microbes (Science)

Their papers

• QIIME allows analysis of high-throughput community sequencing data (2010) — 32,656 citations
• Human gut microbiome viewed across age and geography (2012) — 7,266 citations
• Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans (2011) — 1,814 citations
• Moving pictures of the human microbiome (2011) — 1,133 citations
• Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications (2011) — 745 citations
• Bayesian community-wide culture-independent microbial source tracking (2011) — 1,590 citations
• Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes (2011) — 6,166 citations
• Gut Microbiomes of Malawian Twin Pairs Discordant for Kwashiorkor (2013) — 1,092 citations
• A framework for human microbiome research (2012) — 2,418 citations
• UniFrac: an effective distance metric for microbial community comparison (2011) — 2,599 citations
• Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences (2013) — 8,259 citations
• Structure, Function and Diversity of the Healthy Human Microbiome (2012) — 10,771 citations
• The treatment-naive microbiome in new-onset Crohn's disease. (2014) — 2,964 citations
• Cohabiting family members share microbiota with one another and with their dogs (2013) — 1,009 citations
• A Guide to Enterotypes across the Human Body: Meta-Analysis of Microbial Community Structures in Human Microbiome Datasets (2013) — 499 citations
• Supervised classification of human microbiota. (2011) — 443 citations
• Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 (2019) — 19,259 citations
• A microbial clock provides an accurate estimate of the postmortem interval in a mouse model system (2013) — 348 citations
• Evaluating the Information Content of Shallow Shotgun Metagenomics (2018) — 386 citations
• American Gut: an Open Platform for Citizen Science Microbiome Research (2018) — 775 citations