Rodrigo Lopez

Molecular Biology · 2000–2022

A researcher in the Science corpus: 34 papers; trusts 23 researchers and is trusted by 43 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 365 citations into it; #1,138 of 17,773 by trust here, #85 by citations
• Computational Biology & Bioinformatics — 74 citations into it; #366 of 660 by trust here, #48 by citations
• Spectroscopy — 60 citations into it; #580 of 1,674 by trust here, #11 by citations
• Materials Chemistry — 34 citations into it

Whom Rodrigo Lopez trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Robert D. Finn
2. Sean R. Eddy
3. Stephen F. Altschul
4. Hamish McWilliam

Who trusts Rodrigo Lopez overall

1. James Robinson
2. Fábio Madeira
3. Weizhong Li
4. Patrick D. Schloss
5. R. Pressat
6. Gernot G. Presting
7. UniProt Consortium
8. Kazutaka Katoh

Papers from Rodrigo Lopez's perspective

Ordered by how strongly the researchers Rodrigo Lopez trusts endorse each paper. Same corpus, a different order for every researcher.

1. The Pfam protein families database
2. Basic local alignment search tool.
3. PIRSF: family classification system at the Protein Information Resource
4. The worldwide Protein Data Bank (wwPDB): ensuring a single, uniform archive of PDB data
5. The ProDom database of protein domain families: more emphasis on 3D (Nucleic Acids Res.)
6. InterProScan: protein domains identifier (Nucleic Acids Res.)
7. InterPro: the integrative protein signature database
8. TIGRFAMs: a protein family resource for the functional identification of proteins (Nucleic Acids Res.)
9. Pfam: clans, web tools and services
10. The Pfam protein families database: towards a more sustainable future

Their papers

• The Universal Protein Resource (UniProt) (2004) — 4,459 citations
• The Universal Protein Resource (UniProt): an expanding universe of protein information (2005) — 1,138 citations
• UniProt: the Universal Protein knowledgebase (2004) — 8,617 citations
• InterPro, progress and status in 2005 (2004) — 559 citations
• InterPro: the integrative protein signature database (2008) — 2,089 citations
• Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega (2011) — 15,106 citations
• Clustal W and Clustal X version 2.0 (2007) — 27,603 citations
• The InterPro protein families database: the classification resource after 15 years (2014) — 1,300 citations
• The InterPro Database, 2003 brings increased coverage and new features (2003) — 727 citations
• Multiple sequence alignment with the Clustal series of programs (2003) — 5,174 citations
• Activities at the Universal Protein Resource (UniProt) (2013) — 1,809 citations
• The InterPro database, an integrated documentation resource for protein families, domains and functional sites (2001) — 1,112 citations
• The EMBL-EBI search and sequence analysis tools APIs in 2019 (2019) — 3,783 citations
• The Gene Ontology Annotation (GOA) Database: sharing knowledge in Uniprot with Gene Ontology (2004) — 967 citations
• InterProScan: protein domains identifier (2005) — 2,907 citations
• InterPro in 2017—beyond protein family and domain annotations (2016) — 1,390 citations
• InterPro in 2019: improving coverage, classification and access to protein sequence annotations (2018) — 1,309 citations
• New developments in the InterPro database (2007) — 542 citations
• HMMER web server: 2018 update (2018) — 1,259 citations
• InterProScan 5: genome-scale protein function classification (2014) — 8,123 citations