Miguel Andrade
Molecular Biology · 1993–2019
A researcher in the Science corpus: 12 papers; trusts 7 researchers and is trusted by 21 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 148 citations into it; #2,663 of 17,773 by trust here, #4,657 by citations
- Genetics — 7 citations into it
Whom Miguel Andrade trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Sean R. Eddy
- Andreas Heger
- Tim J. P. Hubbard
- Stephen F. Altschul
- Liisa Holm
- Karl W. Broman
- Alexey G. Murzin
- Minoru Kanehisa
- Huaiyu Mi
- Thomas L. Madden
Who trusts Miguel Andrade overall
- A. Miles
- Junan Li
- Lindsey Doyle
- Gene Ontology Consortium
- Purvesh Khatri
- Bastian Pfeifer
- Giuseppe Gallone
- Chun Fang
- S. G. Ramalli
- Anjali Mahajan
Papers from Miguel Andrade's perspective
Ordered by how strongly the researchers Miguel Andrade trusts endorse each paper. Same corpus, a different order for every researcher.
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
- SIFTS: Structure Integration with Function, Taxonomy and Sequences resource
- The Pfam protein families database: towards a more sustainable future
- The InterPro protein families database: the classification resource after 15 years
- The HUPO PSI's Molecular Interaction format—a community standard for the representation of protein interaction data (Nature Biotechnology)
- SCOP: a structural classification of proteins database
- From genomics to chemical genomics: new developments in KEGG (Nucleic Acids Res.)
- A human protein-protein interaction network: a resource for annotating the proteome. (Cell)
- Data, information, knowledge and principle: back to metabolism in KEGG (Nucleic Acids Res.)
- Mapping and quantifying mammalian transcriptomes by RNA-Seq (Nature Methods)
Their papers
- Protein repeats: structures, functions, and evolution. (2001) — 628 citations
- RepeatsDB 2.0: improved annotation, classification, search and visualization of repeat protein structures (2016) — 37 citations
- A Directed Protein Interaction Network for Investigating Intracellular Signal Transduction (2011) — 364 citations
- Association of genes to genetically inherited diseases using data mining (2002) — 384 citations
- Assessment of computational methods for the analysis of single-cell ATAC-seq data (2019) — 305 citations
- R/parallel – speeding up bioinformatics analysis with R (2008) — 392 citations
- Zc3h13/Flacc is required for adenosine methylation by bridging the mRNA-binding factor Rbm15/Spenito to the m6A machinery component Wtap/Fl(2)d (2018) — 535 citations
- Tissue-specific subnetworks and characteristics of publicly available human protein interaction databases (2011) — 53 citations
- Prediction of protein secondary structure from circular dichroism using theoretically derived spectra (2012) — 741 citations
- HIPPIE: Integrating Protein Interaction Networks with Experiment Based Quality Scores (2012) — 337 citations
- HIPPIE v2.0: enhancing meaningfulness and reliability of protein–protein interaction networks (2016) — 484 citations
- Evaluation of secondary structure of proteins from UV circular dichroism spectra using an unsupervised learning neural network. (1993)