Data processing and analysis with the autoPROC toolbox

By Clemens Vonrhein, C. Flensburg, P. Keller, A. Sharff, Oliver S. Smart, W. Paciorek, T. Womack, Gerard Bricogne. Acta Crystallographica Section D: Biological Crystallography, 2011

1,413 citations recorded by the source corpus.

Typical topics and problems encountered during data processing of diffraction experiments are discussed and the tools provided in the autoPROC software are described.

Subfields: Materials Chemistry, Mechanics of Materials, Molecular Biology

View Paper: https://www.semanticscholar.org/paper/f237e56effe02ed832cd216d3e7d83fd0554cdef

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Citations in the corpus

The PDB_REDO server for macromolecular structure model optimization (2014, methodology): “Automated pipelines are available for data reduction (e.g. Otwinowski & Minor, 1997; Vonrhein et al., 2011; Krug et al., 2012; Monaco et al., 2013; Winter et al., 2013), experimental phasing (e.g. Panjikar et al., 2005; Terwilliger et al., 2009; Pannu et al., 2011), molecular replacement (e.g.…”
DIALS: implementation and evaluation of a new integration package (2018, methodology): “…White et al., 2012; Gati et al., 2014; Stellato et al., 2014; Sierra et al., 2016; Fuller et al., 2017), highframe-rate pixel-array detectors (Henrich et al., 2009), fast sample exchange (Russi et al., 2016) and automated data analysis (Winter, 2010; Winter & McAuley, 2011; Vonrhein et al., 2011).”
Mechanism of Action and Epitopes of Clostridium difficile Toxin B-neutralizing Antibody Bezlotoxumab Revealed by X-ray Crystallography (2014, methodology): “Data were processed with autoPROC (Global Phasing) (36).”
Decision making in xia2 (2013, methodology): “Of particular relevance are Elves (Holton & Alber, 2004), autoPROC (Vonrhein et al., 2011) and xia2 (Winter, 2010).”