Diversity arrays technology (DArT) for high-throughput profiling of the hexaploid wheat genome

By M. Akbari, P. Wenzl, Vanessa Caig, J. Carling, L. Xia, Shiying Yang, Grzegorz Uszynski, V. Mohler, A. Lehmensiek, H. Kuchel and 7 more. Theoretical and Applied Genetics, 2006

633 citations recorded by the source corpus.

Subfields: Genetics, Plant Science

View Paper: https://www.semanticscholar.org/paper/ce8578c6688346c819e6ecf8e018c60bc55b3f48

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Citations in the corpus

Molecular mapping of adult plant stripe rust resistance in wheat and identification of pyramided QTL genotypes (2010, methodology): “DArT marker screening was conducted as described in Akbari et al. (2006) .”
Importance of Genetic Diversity Assessment in Crop Plants and Its Recent Advances: An Overview of Its Analytical Perspectives (2015, neutral): “the recently developed molecular techniques and it has been used in rice [66], wheat [38, 67, 68], barley [69], eucalyptus [70], Arabidopsis [71], cassava [72], pigeon-pea [73], and so forth.”
Genetic improvement of C4 grasses as cellulosic biofuel feedstocks (2009, background): “…good reproducibility and has been applied to higher ploidy levels and consequently large genome size [as demonstrated in hexaploid wheat (Akbari et al. 2006)] and could ultimately be applied for polymorphism analysis in Miscanthus and other biofuel candidate crops with higher ploidy…”
Genomic Selection in Wheat Breeding using Genotyping‐by‐Sequencing (2012, methodology): “Another possibility is that the GBS markers are more uniformly distributed across the genome than the DArT markers, which tend to cluster and show low density in the centromeric regions and the D genome (Akbari et al., 2006; Poland et al., 2012).”
Evaluation of Genomic Prediction Methods for Fusarium Head Blight Resistance in Wheat (2012, methodology): “…DNA was extracted from single seedlings using a cetyltrimethylammonium bromide extraction protocol described by Pallotta et al. (2003). h e DNA was sent to Triticarte (http://www.triticarte.com.au) for wholegenome genotyping using Diversity Array Technology (DArT) markers (Akbari et al., 2006).”
QTL mapping of stripe, leaf and stem rust resistance genes in a Kariega × Avocet S doubled haploid wheat population (2011, background): “Apart from its application in some diploid species (Jaccoud et al. 2001: Wenzl et al. 2004; Wittenberg et al. 2005; Yang et al. 2006; Xia et al. 2005), DArT has been demonstrated to be a powerful instrument in generating polymorphic markers in crops with complex genomes such as wheat ( Akbari et al.”
Principles, requirements and prospects of genetic mapping in plants (2006, positive): “DArT has recently been used in genetic mapping and fingerprinting studies in wheat (Akbari et al., 2006; Semagn et al., 2006), Arabidopsis (Wittenberg et al., 2005), and barley (Wenzl et al., 2004).”
An overview of molecular marker methods for plants (2006, methodology): “…molecular techniques and it has only been used in rice (Jaccoud et al., 2001), barley (Wenzl et al., 2004), eucalyptus (Lezar et al., 2004), Arabidopsis (Wittenberg et al., 2005), cassava (Xia et al., 2005), wheat (Akbari et al., 2006; Semagn et al., 2006), and pigeon-pea (Yang et al., 2006).”
Quantitative trait loci analysis of zinc efficiency and grain zinc concentration in wheat using whole genome average interval mapping (2008, methodology): “DArT (Akbari et al. 2006) analysis used the standard cultivated wheat array, version 2.3, which has approximately 2000 polymorphic markers.”
Quantitative Trait Loci Controlling Fusarium Head Blight Resistance and Low Deoxynivalenol Content in Hexaploid Wheat Population from ‘Arina’ and NK93604 (2007, background): “2006). DArT markers were named as described by Akbari et al. (2006) with a prefix “wPt” followed by numbers corresponding to a particular clone in the genomic representation, where w stands for wheat, P for PstI (primary restriction enzyme used) and t for TaqI (secondary restriction enzyme).”
Assessing Plant Genetic Diversity by Molecular Tools (2009, background): “Despite these advantages, however, EST-SSRs are not without their drawbacks.”