Contribution of major bacterial groups to bacterial biomass production (thymidine and leucine incorporation) in the Delaware estuary

By Matthew T. Cottrell, Kirchman L. David. 2003

296 citations recorded by the source corpus.

Subfields: Ecology, Molecular Biology, Pollution

View Paper: https://www.semanticscholar.org/paper/cbae58449c63c594957a09f29983be07a2924203

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Citations in the corpus

Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea (2011, background): “…of a-Proteobacteria and g-Proteobacteria, and a decrease of b-Proteobacteria, with increasing salinity has been identified in different estuaries (that is, Delaware Bay (Cottrell and Kirchman, 2003), Chesapeake Bay (Bouvier and del Giorgio, 2002) or Pearl River estuary (Zhang et al., 2006)).”
Diversity, abundance, and biomass production of bacterial groups in the western Arctic Ocean (2007, methodology): “The remaining Bacteroidetes clones did not form clusters and had closest BLASTS hits to other clones from the Arctic Ocean, Massachusetts coastal waters, and UK coastal waters.”
Biodiversity of Vibrios (2004, background): “Vibrios may provide essential polyunsatured fatty acids to the aquatic food web, which many aquatic organisms cannot produce de novo (88, 282).”
Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques (2008, methodology): “The examination of MAR–FISH preparations has recently been automated, which has enabled high-throughput analysis of many samples and replicate”
Prokaryotic community structure and heterotrophic production in a river-influenced coastal arctic ecosystem (2006, background): “The archaeal probe Arch915 targeted only 4 sequences in the domain Bacteria.”
Microbial community structure and its functional implications (2009, background): “Studies indicate that in marine plankton, common organisms typically carry out most of the activit”
Contribution of Archaea to Total Prokaryotic Production in the Deep Atlantic Ocean (2005, background): “Remarkably, the percentage of prokaryotic cells scoring as metabolically active in the deep waters is similar to the range for prokaryotes in surface waters by microautoradiography and with the use of simple organic substrates such as glucose, thymidine, or leucine (5, 10, 13, 14, 24, 34).”
Abundance and activity of major groups of prokaryotic plankton in the coastal North Sea during spring and summer (2006, background): “Generally, Bacteroidetes are abundant in coastal and temperate surface waters (Glöckner et al. 1999, Eilers et al. 2001, Kirchman 2002, Cottrell & Kirchman 2003).”
Linkage between crustacean zooplankton and aquatic bacteria (2010, background): “In the Delaware estuary, Cottrell & Kirchman (2003) found chitinase genes in a handful of bacterial groups including Enterobacteriaceae, Alteromondaceae, Vibrioceae, and Alphaproteobacteria of the Roseobacter clade.”
Single-cell analysis of bacterial growth, cell size, and community structure in the Delaware estuary (2004, methodology): “Average bacterial cell volumes of Eub338-positive and -negative bacteria ranged from 0.018 µm3 at the 16 PSU station in June to 0.040 µm3 at the 29 PSU station in March (Fig.”
Archaeal uptake of enantiomeric amino acids in the meso‐ and bathypelagic waters of the North Atlantic (2006, unknown): “The recently developed approach of combining FISH with microautoradiography allows the determination of the uptake potential of specific dissolved organic matter (DOM) compounds by individual members of the prokaryotic community (Ouverney and Fuhrman 2000; Cottrell and Kirchman 2000, 2003).”
Changes in bacterial activity and community structure in response to dissolved organic matter in the Hudson River, New York (2004, methodology): “After staining with DAPI, the sample was mounted with Vectashield and Citifluor (1:4) and examined with a semi-automated image analysis system coupled to an Olympus epifluorescence microscope (Cottrell & Kirchman 2003).”