The EBI RDF platform: linked open data for the life sciences
By S. Jupp, J. Malone, Jerven T. Bolleman, Marco Brandizi, M. Davies, L. García, Anna Gaulton, S. Gehant, Camille Laibe, Nicole Redaschi and 6 more. 2014
243 citations recorded by the source corpus.
Motivation: Resource description framework (RDF) is an emerging technology for describing, publishing and linking life science data. As a major provider of bioinformatics data and services, the European Bioinformatics Institute (EBI) is committed to making data readily accessible to the community in ways that meet existing demand. The EBI RDF platform has been developed to meet an increasing demand to coordinate RDF activities across the institute and provides a new entry point to querying and exploring integrated resources available at the EBI. Availability: http://www.ebi.ac.uk/rdf Contact: jupp@ebi.ac.uk
Subfields: Artificial Intelligence, Information Systems, Molecular Biology
How researchers see this paper
The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.
In Artificial Intelligence
- Marc Robinson-Rechavi
- Manuel Gil
- Maria Anisimova
- Evan E. Bolton
- Yasunori Yamamoto
- Atsuko Yamaguchi
- Christophe Dessimoz
- Andrea Splendiani
In Information Systems
In Molecular Biology
- Christophe Dessimoz
- Tarcisio Mendes de Farias
- Manuel Gil
- Marc Robinson-Rechavi
- Maria Anisimova
- Evan E. Bolton
- Stephen H. Bryant
- Ari Löytynoja
Citations in the corpus
- YummyData: providing high-quality open life science data (2018, background): “For instance, PathwayCommons, the EBI RDF platform (4), OpenPHACTS (12) and Linked Life Data (http://linkedlifedata.”
- PubChemRDF: towards the semantic annotation of PubChem compound and substance databases (2015, background): “…a link between the PubChem substance and the PDB record is exposed: If a PubChem substance was deposited by ChEMBL, it is cross-linked to EBI RDF [21] and ChEMBL RDF [27]: If a PubChem depositor provided the PubMed references for a given substance, the literature mentioning of a given substance…”
- Enabling semantic queries across federated bioinformatics databases (2019, methodology): “To the best of our knowledge, two semantic models currently exist as initial attempts to structure gene expression related data: the Relation Ontology (RO) (51) and the EA model (52).”