Analysis of the Plasmodium falciparum proteome by high-accuracy mass spectrometry

By E. Lasonder, Yasushi Ishihama, Jens S. Andersen, A. Vermunt, A. Pain, R. Sauerwein, W. Eling, N. Hall, A. Waters, H. Stunnenberg and 1 more. Nature, 2002

673 citations recorded by the source corpus.

Subfields: Molecular Biology, Public Health, Environmental and Occupational Health

View Paper: https://www.semanticscholar.org/paper/78d6acb51ce262a718039cabb4951c3354794b94

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Citations in the corpus

The Transcriptome of the Intraerythrocytic Developmental Cycle of Plasmodium falciparum (2003, background): “2001), and mass spectrometry (Florens et al. 2002; Lasonder et al. 2002) on a limited number of samples from different developmental stages.”
The s48/45 six-cysteine proteins: mediators of interaction throughout the Plasmodium life cycle (2016, background): “…stage II, and on female gametes following emergence from red blood cells, both in P. falciparum and P. berghei (van Dijk et al., 2001, 2010; Florens et al., 2002; Lasonder et al., 2002; Le Roch et al., 2003; Hall et al., 2005; Khan et al., 2005; van Schaijk et al., 2006; Silvestrini et al., 2010).”
Epidemiology and Infectivity of Plasmodium falciparum and Plasmodium vivax Gametocytes in Relation to Malaria Control and Elimination (2011, background): “proteomics have identified 250 to 300 sexual stage-specific genes, 75% of which were hypothetical at the time of identification (149, 155, 239, 247).”
Exponentially Modified Protein Abundance Index (emPAI) for Estimation of Absolute Protein Amount in Proteomics by the Number of Sequenced Peptides per Protein*S (2005, background): “tein expression in different states (15).”
Selective upregulation of a single distinctly structured var gene in chondroitin sulphate A‐adhering Plasmodium falciparum involved in pregnancy‐associated malaria (2003, methodology): “, 1999), the fact that NF54 was used for protein expression analysis in conjunction with the 3D7 genome sequence project (Lasonder et al., 2002), and the data reported here that all primers designed on the basis of 3D7 sequences yielded PCR bands of the predicted size, all indicate that NF54 and 3D7”
Identification of Proteins in Human Cytomegalovirus (HCMV) Particles: the HCMV Proteome (2004, background): “Mass spectrometry (MS)-based proteomic approaches have been applied to analyze the proteomes of a number of organisms, including Deinococcus radiodurans, Plasmodium falciparum, yeast, and adenovirus (9, 14, 24 , 28, 41).”
Three Members of the 6-cys Protein Family of Plasmodium Play a Role in Gamete Fertility (2010, neutral): “References: 1 [4]; 2 [52]; 3 [17]; 4 [18]; 5 [71]; 6 [72]; 7 [73]; 8 [74]; 9 [12]; 10 [75]; 11 [10]; 12 [13]; 13 [8]; 14 [16]; 15 [14]; 16 [41]; 17 [76]; 18 [15].”
Proteome-wide analysis of chaperonin-dependent protein folding in Escherichia coli. (2005, methodology): “Protein Identification by Mass Spectrometry Isolated GroEL/GroES/substrate complexes were separated by SDS-PAGE, and proteins contained in gel slices were identified by LC-MS/MS (Lasonder et al., 2002).”
Parts per Million Mass Accuracy on an Orbitrap Mass Spectrometer via Lock Mass Injection into a C-trap*S (2005, background): “After systematic mass errors have been removed by iterative recalibration (31) or by lock mass as shown here, a better strategy would be to specify very tight mass tolerances for well defined peaks and larger mass tolerances for weak peaks.”
Comparative Genomics in Eukaryotes (2005, background): “, 2003) and two proteomics datasets (Florens et al., 2002; Lasonder et al., 2002) have been published.”