Ecology of prokaryotic viruses.

By M. Weinbauer. FEMS Microbiology Reviews, 2004

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Citations in the corpus

Estimates of protozoan‐ and viral‐mediated mortality of bacterioplankton in Lake Bourget (France) (2005, background): “A large majority of aquatic viral ecological studies have been carried out in seawater (see Wommack & Colwell, 2000; Sime-Ngando et al., 2003; Weinbauer, 2004).”
Freshwater and marine virioplankton: a brief overview of commonalities and differences (2008, background): “During the past 20 years it has become obvious that viruses play an important role in the movement of carbon, nutrients and energy in marine ecosystems (Wilhelm & Suttle, 1999; Weinbauer, 2004).”
Bacteriophages of the Human Gut: The "Known Unknown" of the Microbiome. (2019, background): “The original hypothesis of linear virus-to-microbe ratio (VMR), based on early data from marine and freshwater microbial communities (Weinbauer, 2004; C Thingstad et al., 2008), has been revised recently, with power law and unimodal models seeming to more accurately reflect extensive variation in…”
RNA-guided genetic silencing systems in bacteria and archaea (2012, background): “However, viruses outnumber their microbial hosts in every ecological setting, and the selective pressures imposed by these rapidly evolving parasites has driven the diversification of microbial defence system”
Picophytoplankton in Freshwater Ecosystems: The Importance of Small-Sized Phototrophs (2008, background): “It is interesting to note the changing perceptions of viruses in recent years: no longer are they seen as universally pernicious parasites but as catalysts of information transfer and sustainers of the microbial web of energy transfer and matter cycling (Weinbauer, 2004).”
The influence of external factors on bacteriophages—review (2011, background): “They are responsible for 10– 80% of total bacterial mortality in aquatic ecosystems and are an important factor limiting bacterial populations (Weinbauer 2004).”
Microbial community structure in the sea surface microlayer at two contrasting coastal sites in the northwestern Mediterranean Sea (2006, background): “…were 24 and 14% lower in SSW (at 50 cm depth) than in the SML. UV radiation can act in contrasting ways, either by decreasing viral abundance and infectivity (Suttle & Chen 1992, Noble & Fuhrman 1997, Wilhelm et al. 1998a,b), or by inducing the lytic cycle in lysogenic viruses (Weinbauer 2004).”
RNA Viral Community in Human Feces: Prevalence of Plant Pathogenic Viruses (2005, background): “Bacteriophages can influence food digestion by regulating microbial communities in the human GI tract through lytic and lysogenic replication [4].”
Viruses in soil: Nano-scale undead drivers of microbial life, biogeochemical turnover and ecosystem functions (2018, background): “…viruses from soil (Williamson et al., 2013), (2) because RNA and single-stranded DNA viruses are not readily detected by fluorescent direct count methods (Steward et al., 2013), and (3) because intracellular phage particles are only visible in the final stages of infection (Weinbauer, 2004) (Fig.”
Exploring the Vast Diversity of Marine Viruses (2007, background): “For further reading on marine viruses, see the following comprehensive reviews: Dunigan et al., 2006; Fuhrman, 1999; Proctor, 1997; Suttle, 2005; Weinbauer, 2004; and Wommack and Colwell, 2000. aCknowLEDgEMEnts MBS and LRT are partially sup- ported by the Gordon and Betty Moore Foundation and NSF…”
Spinning the “Ferrous Wheel”: The importance of the microbial community in an iron budget during the FeCycle experiment (2005, result): “These lower estimates from FeCycle are toward the upper bound in abundances reported for other waters [Wilhelm et al., 2003; Weinbauer, 2004], but are comparable with those measured from HNLC waters, off the coast of Peru, by Poorvin et al.”
Pseudomonas aeruginosa population structure revisited under environmental focus (2010, background): “Though phages show frequently a quite narrow host spectrum, limited to one or few species, phages usually do not lyse all strains of a single species (Weinbauer, 2004).”
The under‐ice microbiome of seasonally frozen lakes (2013, result): “2003), contributing to viral production rates that are comparable to those reported under warmer conditions (Weinbauer 2004; Laybourn-Parry et al. 2007).”
Varieties of Living Things: Life at the Intersection of Lineage and Metabolism (2009, background): “It is clear to us that leaving viruses out of evolutionary, ecological, physiological or conceptual studies of living entities, would allow only an incomplete understanding of life at any level (Weinbauer and Rassoulzadegan 2004; Wilhelm and Suttle 1999; Suttle 2005).”
Viruses as pathogens of marine organisms—from bacteria to whales (2006, methodology): “These include the use of epi£uorescence microscopy (Noble & Fuhrman, 1998; Wen et al., 2004) and £ow cytometry (Brussaard et al., 2000) for virus enumeration in seawater.”