Exploring the Vast Diversity of Marine Viruses
By Mya Breitbart, Luke R. Thompson, C. Suttle, Matthew B. Sullivan. 2007
271 citations recorded by the source corpus.
1991; Moebus, 1992; Waterbury and Mya brEitbart (mya@marine.usf.edu) is Assistant Professor, College of Marine Science, University of South Florida, St. Petersburg, FL, USA. LukE r. thoMpson is Ph.D. Candidate, Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA. Curtis a. suttLE is Professor, Departments of Earth & Ocean Sciences, Botany, and Microbiology & Immunology, University of British Columbia, Vancouver, Canada. MatthEw b. suLLiVan is Postdoctoral Associate, Department of Civil and Environmental Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA. > sEC tion V. E x a MpLE s of DiVEr sit y > ChaptEr 10 . MiCrobiaL CoMMunitiE s > a . watEr CoLuMn
Subfields: Ecology
View Paper: https://www.semanticscholar.org/paper/5ced1eb58e68154f48db4bf47ffe80de8ea72282
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Citations in the corpus
- Computational approaches to predict bacteriophage–host relationships (2015, background): “One example is auxiliary metabolic genes (Breitbart et al. 2007), such as photosynthesis genes in Cyanophages that are similar to their homologs encoded on the genome of their host (Sullivan, Wa-terbury and Chisholm 2003; Sharon et al. 2011).”
- The Pacific Ocean Virome (POV): A Marine Viral Metagenomic Dataset and Associated Protein Clusters for Quantitative Viral Ecology (2013, unknown): “1000 m sample should be used with caution, particularly for analyses related to auxiliary metabolic genes (AMGs, sensu [58]) or other genetic data known to co-occur in bacteria.”
- Phages in nature (2011, background): “These genes are often referred to as “host genes” or more recently AMGs (auxiliary metabolic genes).(84) Among the most interesting AMGs identified in cyanophages are the genes involved in photosynthesis which has led to some cyanophages being referred to as “photosynthetic phages”.”
- VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data (2017, background): “A prime example of such genes are auxiliary metabolic genes (AMGs) encoded in viruses that are acquired from their hosts and used to bolster the metabolism of the host for increased virion production [56 – 58].”