Phylogenetic species recognition and species concepts in fungi.

By John W. Taylor, D. Jacobson, S. Kroken, T. Kasuga, David M. Geiser, D. Hibbett, Matthew Fisher. Fungal Genetics and Biology, 2000

1,848 citations recorded by the source corpus.

Subfields: Cell Biology, Molecular Biology, Plant Science

View Paper: https://www.semanticscholar.org/paper/a348655a221e2e67d7e922b8e431d0f3883212ac

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Citations in the corpus

Botryosphaeriaceae as endophytes and latent pathogens of woody plants: diversity, ecology and impact (2007, background): “While still useful in some situations, this species concept tends to underestimate the true diversity (Taylor et al. 2000).”
The Colletotrichum gloeosporioides species complex (2012, background): “This lack of congruence between gene trees is a signal that the diversity being sampled is below the species level, according to the logic of the genealogical concordance phylogenetic species recognition (GCPSR) concept (Taylor et al. 2000).”
The Impact of Species Concept on Biodiversity Studies (2004, background): “It is thus little wonder that each concept diagnoses a different sort of “species.” Obviously, a single morpho-species can contain multiple species (sensu BSC or PSC) where morphology is cryptic or a limited number of characters are studied (Kasuga et al. 1999; Taylor et al. 2000 ).”
FUSARIUM-ID v. 1.0: A DNA Sequence Database for Identifying Fusarium (2004, methodology): “With the recent advent of multilocus phylogenetic methods which allow for the objective identification of species boundaries in the Fungi (Taylor et al., 2000), relationships among well-defined Fusarium species have been inferred, showing a great deal of species diversity that was vastly under-estim”
The first 100 Trichoderma species characterized by molecular data (2006, methodology): “1998, 2000), researchers felt the need to put their phylogenies on the ground of analysis of several unlinked genes (Taylor et al. 2000).”
Five simple guidelines for establishing basic authenticity and reliability of newly generated fungal ITS sequences. (2012, methodology): “A phylogenetic analysis of the query sequence and the 20-30 best BLAST matches (or as many as alignability allows) is a good starting point for a more robust examination of the taxonomic affiliation of the query sequence (cf. Taylor et al. 2000).”
Diversity and evolution of Fusarium species in the Gibberella fujikuroi complex (2009, neutral): “Typically in these situations, the PSR is based on the data for multiple unlinked genomic regions (O’Donnell et al ., 1998, 2000b; Taylor et al ., 2000), while additional morphological, physiological and ecological data for MSR and data on reproductive behaviour for BSR are also included and…”
Sudden death syndrome of soybean in South America is caused by four species of Fusarium: Fusarium brasiliense sp. nov., F. cuneirostrum sp. nov., F. tucumaniae, and F. virguliforme (2005, positive): “Lastly, because the single strain of F. cuneirostrum NRRL 31949 from a diseased soybean possesses some morphological and phylogenetic differences from other strains of the species isolated from dry bean and mung bean, and because pathogenicity of these species of Fusarium on different hosts could ha”
No biogeographical pattern for a root-associated fungal species complex (2011, background): “Mapping the geographical distributions of the most abundant species (Phialocephala subalpina) and one of the rarest species (CSP12) showed that both species were widespread (Fig.”
DNA-based species delimitation in algae (2014, background): “In practice, species can thus be identified if gene genealogies of multiple unlinked loci show congruent patterns of reciprocal monophyly (Taylor et al., 2000; Dettman et al., 2003).”