Development of an extensive set of 16S rDNA‐targeted primers for quantification of pathogenic and indigenous bacteria in faecal samples by real‐time PCR
By T. Rinttilä, Anna Kassinen, Erja Malinen, L. Krogius, A. Palva. Journal of Applied Microbiology, 2004
1,047 citations recorded by the source corpus.
Subfields: Food Science, Infectious Diseases, Molecular Biology
View Paper: https://www.semanticscholar.org/paper/9b38421bcedc48d6ac9202dbb7abb5f912742227
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Citations in the corpus
- Resistant Starches Types 2 and 4 Have Differential Effects on the Composition of the Fecal Microbiota in Human Subjects (2010, methodology): “[31], using a Mastercycler Realplex2 (Eppendorf AG, Hamburg, Germany) and the Bifidobacteriumspecific primers (F: 59TCGCGTC(C/T)GGTGTGAAAG’3) and R: 59CCACATCCAGC(A/G)TCCAC’3) [59].”
- Effect of inulin on the human gut microbiota: stimulation of Bifidobacterium adolescentis and Faecalibacterium prausnitzii (2008, neutral): “(47) Erec870R AGTTTYATTCTTGCGAACG Rintillä et al.”
- Influence of red wine polyphenols and ethanol on the gut microbiota ecology and biochemical biomarkers. (2012, neutral): “ACTCGTTCTTCCCATGT Rinttilä et al 2004 (27) 144”
- Quantitative PCR provides a simple and accessible method for quantitative microbiota profiling (2020, methodology): “The 10-log-fold standard curves ranging from 10(2) to 10(7) copies were produced using the full-length amplicons of 16S rRNA gene of appropriate reference organisms [23] (Ruminococcus productus for Clostridium cluster XIVa, Bacteroides fragilis for Bacteroidetes, Bifidobacterium longum for Bifidobac”
- Gut microbiota in children with type 1 diabetes differs from that in healthy children: a case-control study (2013, methodology): “Specific primers targeting different bacterial genera were used to characterize the fecal microbiota by quantitative real-time qPCR (Table 1) [30-36].”
- Through Ageing, and Beyond: Gut Microbiota and Inflammatory Status in Seniors and Centenarians (2010, background): “The thermocycling conditions and universal primers for bacteria and specific primers for Clostridium leptum group, Bifidobacterium genus, Akkermansia muciniphila, Faecalibacterium prausnitzii and for the genus Methanobrevibacter, representing a dominant archaeon in the human gut bacteria have been d”
- Two Routes of Metabolic Cross-Feeding between Bifidobacterium adolescentis and Butyrate-Producing Anaerobes from the Human Gut (2006, methodology): “amplified with primers BifF (TCGCGTCYGGTGTGAAAG) (39) and g-Bifid-R”