Seasonal Dynamics of Previously Unknown Fungal Lineages in Tundra Soils

By Christopher W. Schadt, Andrew P. Martin, D. Lipson, S. K. Schmidt. Science, 2003

624 citations recorded by the source corpus.

Subfields: Atmospheric Science, Cell Biology, Ecology

View Paper: https://www.semanticscholar.org/paper/6e20e243628990a6ca704092084a08fedb98531e

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Citations in the corpus

FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild (2016, background): “This group was first identified by environmental sequencing and showed seasonal patterns consistent with plant growth (Schadt et al., 2003), suggesting it may belong to a mycorrhizal guild.”
Direct and indirect effects of climate change on soil microbial and soil microbial‐plant interactions: What lies ahead? (2015, background): “Variation in root-shoot phenology will impact rhizosphere interactions and may influence the distinct seasonal assemblages of soil microbial groups (Schadt et al. 2003, Waldrop and Firestone 2006, Dumbrell et al. 2010, 2011, Zhang et al. 2014).”
Sequences, the environment and fungi (2006, background): “Novel nuLSU rDNA lineages of ascomycetes have been detected in tundra soils, appearing during the winter and early spring (Schadt et al. 2003).”
Altered patterns of soil carbon substrate usage and heterotrophic respiration in a pine forest with elevated CO2 and N fertilization (2008, background): “This previous study, however, examined soils collected during the spring, when bacterial functioning can dominate in soil profiles relative to fall (Lipson et al., 2002; Schadt et al., 2003).”
UniFrac – An online tool for comparing microbial community diversity in a phylogenetic context (2006, background): “The P-test, in particular, has been broadly applied in microbial ecology [15-20] despite the absence, until recently [21], of a convenient implementation.”
Contrasting sensitivity to extreme winter warming events of dominant sub‐Arctic heathland bryophyte and lichen species (2011, background): “Indeed, the microbial community composition is known to change during winter (Schadt et al. 2003), considerable ecosystem carbon fluxes occur (Larsen et al. 2007; Liptzin et al. 2009) and some plants actively grow new roots underneath the snow layer to access nutrients (Onipchenko et al. 2009).”
High-level classification of the Fungi and a tool for evolutionary ecological analyses (2018, methodology): “Evolutionary ecological analyses are more powerful when using either (1) real community sequence data (e.g. Schadt et al. 2003; Veldre et al. 2013) or (2) community taxonomic data mapped onto sequence-based phylogenies (Branco 2010; Fouquier et al. 2016).”
Fungal Community Analysis by Large-Scale Sequencing of Environmental Samples (2005, background): “These regions are useful for phylogenetic characterization of novel lineages (30, 38), but lack sufficient resolution to discriminate among closely related species, resulting in underestimation of diversity.”
Thermal adaptation of soil microbial respiration to elevated temperature. (2008, background): “Schadt et al. 2003; Waldrop & Firestone 2006) and recent work (Hall et al. 2008) with freshwater bacterial communities suggests such shifts are associated with changes from cold- to warm-adapted populations as temperatures fluctuate across seasons.”
Spatial separation of litter decomposition and mycorrhizal nitrogen uptake in a boreal forest. (2007, background): “Journal compilation © New Phytologist (2006) a recently discovered lineage (Schadt et al., 2003) that hitherto has been recorded only as environmental DNA and seems to be phylogenetically separate from other known ascomycetes.”
Shotgun metagenomes and multiple primer pair-barcode combinations of amplicons reveal biases in metabarcoding analyses of fungi (2015, neutral): “2011), the unprecedented dominance of Archaeorhizomycetes in molecular studies based on cloning of long DNA fragments (Schadt et al. 2003; Castro et al. 2010) may represent an extreme example of a cloning bias.”
Distribution of Mycorrhizal Types among Alpine Vascular Plant Families on the Beartooth Plateau, Rocky Mountains, U.S.A., in Reference to Large-Scale Patterns in Arctic–Alpine Habitats (2005, background): “Additionally, microbial activity in the alpine tundra was recently found to reach its peak under snow, and models of carbon dioxide dynamics (which impact global climate change) may need to be reassessed ( Schadt et al., 2003 ).”