Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion

By Diego Martínez, J. Challacombe, Ingo Morgenstern, D. Hibbett, M. Schmoll, C. Kubicek, P. Ferreira, F. J. Ruiz-Dueñas, Angel T. Martı́nez, P. Kersten and 43 more. Proceedings of the National Academy of Sciences of the United States of America, 2009

609 citations recorded by the source corpus.

Subfields: Biomedical Engineering, Plant Science

View Paper: https://www.semanticscholar.org/paper/5fe667809fee36f0a8115a267170961ef2825f8b

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Citations in the corpus

Improving Enzymes for Biomass Conversion: A Basic Research Perspective (2010, background): “reesei) produce oxidoreductases such as laccases and lignin peroxidases, which cooperate in the oxidative depolymerization of plant cell wall polysaccharides and lignins [29, 39].”
The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes (2012, background): “This is consistent with results from transcriptome and exo-proteome analyses, which demonstrate differential regulation of several P450s under lignocellulolytic culture conditions in selected model basidiomycetes (95, 137, 139).”
Fueling the future with fungal genomics (2011, methodology): “As of this writing, complete genome sequences have been published for three wood-decaying Agaricomycotina, Phanerochaete chrysosporium, Postia placenta, and Schizophyllum commune (Martinez et al. 2004, 2009; Ohm et al. 2010).”
Laccases: a never-ending story (2010, background): “Likewise, the occurrence of laccase genes in brown-rot fungi has been identified with the discovery of two laccase gene models in the Postia placenta genome [146].”
Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi (2014, background): “Proc Natl Acad Sci USA 108(22):9166–9171.”
Process Design and Economics for the Conversion of Lignocellulosic Biomass to Hydrocarbons: Dilute-Acid and Enzymatic Deconstruction of Biomass to Sugars and Biological Conversion of Sugars to Hydrocarbons (2013, background): “Regarding lignin removal or fractionation before or concomitantly with carbohydrate deconstruction, there are many processing options available for this type of work, including biological pretreatment [119-125], alkaline or acid-based pulping-like processes [120, 126], numerous Organosolv processes ”
Insights into the oxidative degradation of cellulose by a copper metalloenzyme that exploits biomass components (2011, background): “In planta, these substrates are often embedded in highly complex composites with other polysaccharides andwith lignin (3, 8, 15, 28).”