Deep-Sea Oil Plume Enriches Indigenous Oil-Degrading Bacteria

By T. Hazen, E. Dubinsky, Todd Z. DeSantis, Gary L. Andersen, Y. Piceno, Navjeet Singh, Janet K. Jansson, A. Probst, S. Borglin, J. Fortney and 22 more. Science, 2010

1,204 citations recorded by the source corpus.

Subfields: Global and Planetary Change, Pollution

View Paper: https://www.semanticscholar.org/paper/59637b355d8bb4dc051e4896a9917308f6d80381

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Citations in the corpus

Dysbiosis of the Gut Microbiota Is Associated with HIV Disease Progression and Tryptophan Catabolism (2013, methodology): “Four biopsieswere formalin-fixed and paraffin-embedded for immunohistochemistry; 12 biopsies were placed immediately in 15 ml of RPMI 1640 with 15% fetal calf serum and processed for flow cytometric analysis within 4 hours of collection; two biopsies were placed in RNAlater (Life Technologies) and f”
Impact of root exudates and plant defense signaling on bacterial communities in the rhizosphere. A review (2011, background): “The new generation PhyloChip that contains 60,000 bacterial operational taxonomic units (Hazen et al. 2010) facilitates assessment of qualitative and quantitative shifts in microbial communities.”
Stochasticity, succession, and environmental perturbations in a fluidic ecosystem (2014, methodology): “Various snap-shot samples from both plume and nonplume areas 2 mo after the spill were analyzed with omic technologies (46, 47).”
EMIRGE: reconstruction of full-length ribosomal genes from microbial community short read sequencing data (2011, neutral): “More recently, technologies such as pyrotag sequencing of short hyper-variable regions [2,3], Illumina sequencing of variable tags [4-7], and hybridization to specialized high-density microarrays (for example, Phylochip) [8-10] have accelerated the throughput of SSUbased microbial community characte”
Composition and fate of gas and oil released to the water column during the Deepwater Horizon oil spill (2011, background): “(2) reported half-lives for n-alkanes on the order of a few days.”
Oil carbon entered the coastal planktonic food web during the Deepwater Horizon oil spill (2010, background): “Recent publications document the scope of deep subsea oil and methane along the northern Gulf slope [1, 3, 4], but scant evidence exists for the presence of subsea oil in warm (>25 ◦C), shallow shelf waters.”
Disease-induced assemblage of a plant-beneficial bacterial consortium (2018, methodology): “For each treatment and time point, four replicates (with DNA from 4 soil/rhizosphere samples each) were subjected to PhyloChip analysis by Second Genome Inc. (San Francisco, USA) as described previously [19, 20, 27, 28].”
Plastic Degradation and Its Environmental Implications with Special Reference to Poly(ethylene terephthalate) (2012, methodology): “Bacteria have been utilised in the clean-up of oil spills [64–67], PCBs [68] and”
Marine snow formation in the aftermath of the Deepwater Horizon oil spill in the Gulf of Mexico (2012, background): “Bacteria with genes for hydrocarbon degradation were clearly enriched within the plumes and were possibly responsible for the disappearance of the biodegradable fraction of the oil-contaminants (Hazen et al 2010, Valentine et al 2010, Kessler et al 2011, Redmond and Valentine 2011, Lu et al 2012).”