From genomics to metagenomics.

By N. Desai, Dionysios A. Antonopoulos, Jack A. Gilbert, Elizabeth M. Glass, Folker Meyer. 2012

97 citations recorded by the source corpus.

How researchers see this paper

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In Molecular Biology

Citations in the corpus

Clustering huge protein sequence sets in linear time (2017, background): “Therefore, computing and storage costs are now dominating metagenomics [4, 5, 6].”
MMseqs2: sensitive protein sequence searching for the analysis of massive data sets (2017, methodology): “In metagenomics, computational costs now dominate sequencing costs [5, 22, 27] and protein searches typically consume > 90% of computational resources [27], even though the gold 25”
DNA Sequencing as a Tool to Monitor Marine Ecological Status (2017, background): “Despite the enormous opportunities posed by this technological revolution, the vast amount of data generated requires new solutions for data handling, storage, processing, documentation, visualization, and dissemination (Desai et al., 2012; Muir et al., 2016).”
The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome (2012, background): “; licensee BioMed Cen Creative Commons Attribution License (http:/ distribution, and reproduction in any medium “bioinformatics bottleneck”) [9,10].”
Standard methods for molecular research in Apis mellifera (2013, methodology): “One helpful review of modern techniques is given by Desai et al. (2012) and there are numerous advances and tutorials available via the forums Seqanswers.com and the GALAXY wiki 34 Evans et al. (http://wiki.galaxyproject.org/FrontPage).”
The role of Information and Communication Technologies in healthcare: taxonomies, perspectives, and challenges (2018, background): “pensable for basic biological research and in numerous applied fields [47], such as comparative genomics (including metagenomics [308, 14, 79, 233, 327, 169], ribosomal RNA (rRNA) classification [212], infectious disease diagnostics [147]),”