Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice

By S. Kikuchi, Kouji Satoh, Toshifumi Nagata, N. Kawagashira, K. Doi, N. Kishimoto, J. Yazaki, M. Ishikawa, H. Yamada, Hisako Ooka and 64 more. Science, 2003

895 citations recorded by the source corpus.

Subfields: Biomedical Engineering, Molecular Biology, Plant Science

View Paper: https://www.semanticscholar.org/paper/36e9cfcf965769d3340efe9d6de228d38464dd50

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Citations in the corpus

The Genomes of Oryza sativa: A History of Duplications (2005, methodology): “cDNAs from the Knowledge-Based Oryza Molecular-Biological Encyclopedia [”
Genome-Wide Analysis of the ERF Gene Family in Arabidopsis and Rice[W] (2006, background): “This group includes genes such as LEP (AtERF#085; van der Graaff et al., 2000) and ESR1/DRN (AtERF#089; Banno et al., 2001; Kirch et al., 2003) that are involved in the differentiation and development of organs.”
Natural variation in GS5 plays an important role in regulating grain size and yield in rice (2011, background): “6-kb region; we identified a full-length cDNA of 1822 bp corresponding to the ORF (NCBI accession number AK106800”
The fast and the cheap: SNP and DArT-based whole genome profiling for crop improvement (2005, background): “Technological progress and increased investment in genomics have resulted in the complete genome sequence and comprehensive transcriptome sequences for many species, including plants (Arabidopsis Genome Initiative 2000; Goff et al. 2002; Yu et al 2002; Kikuchi et al. 2003).”
Interactome: gateway into systems biology. (2005, background): “ORFeome projects are underway and ongoing for several eukaryotic organisms, yeast, worm, plants, mouse and humans (8,27,29,36–42).”
Over-expression of the stress-induced OsWRKY45 enhances disease resistance and drought tolerance in Arabidopsis (2009, background): “, 2006), AK105939, AK066255 and AK063697 (Kikuchi et al., 2003).”
Ehd1, a B-type response regulator in rice, confers short-day promotion of flowering and controls FT-like gene expression independently of Hd1. (2004, methodology): “Other genes downstream of Ehd1 To further identify genes downstream of Ehd1, we performed a microarray analysis using custom 60-bp oligonucleotide arrays with 22,000 probes designed with fulllength cDNA sequences of rice (Kikuchi et al. 2003).”
Root-Specific Expression of OsNAC10 Improves Drought Tolerance and Grain Yield in Rice under Field Drought Conditions1[W][OA] (2010, background): “About 45% of these transcription factors are reported to be from gene families specific to plants (Riechmann et al., 2000; Kikuchi et al., 2003).”
An Overview of Gibberellin Metabolism Enzyme Genes and Their Related Mutants in Rice1[w] (2004, methodology): “…plants (including Arabidopsis, lettuce [Lactuca sativa], pea [Pisum sativum], tomato [Lycopersicon esculentum], and rice) were used as probes to screen in silico all available rice DNA databases (Feng et al., 2002; Goff et al., 2002; Sasaki et al., 2002b; Yu et al., 2002; Kikuchi et al., 2003).”
Physiology and molecular biology of stress tolerance in plants (2006, background): “Technology (POSTECH), Korea Knowledge-based Oryza Molecular ~30,000 cDNA clones (rice) http://cdna01.dna.affrc.go.jp/cDN Kikuchi et al. (2003).”