The Human Protein Atlas—a tool for pathology
By F. Pontén, K. Jirström, Mathias Uhlen. Journal of Pathology, 2008
1,078 citations recorded by the source corpus.
Subfields: Molecular Biology, Radiology, Nuclear Medicine and Imaging, Spectroscopy
View Paper: https://www.semanticscholar.org/paper/26080fd66e332e70ebf1c96188d7389e8072b1e0
How researchers see this paper
The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.
In Molecular Biology
- Adil Mardinoglu
- Andreas Keller
- Christina Backes
- Jens Nielsen
- M. Huss
- Alexandra Naba
- Mathias Uhlen
- R. Hynes
In Spectroscopy
Citations in the corpus
- The Extracellular Matrix: Tools and Insights for the “Omics” Era (2015, neutral): “This may have resulted in an over-prediction and, based on future experiments, we may revise our definition and distinguishmore precisely those proteins belonging to the matrisome from those belonging to the secretome (the human protein atlas [71] predicts that over 3000 human genes have a secreted ”
- ChemProt: a disease chemical biology database (2010, methodology): “Additionally, enrichment analysis results of the proteins in the complex are shown, with respect to disease association (OMIM, BioAlma), GO terms (biological process, cellular component) and tissue specificity (Human Protein Atlas, GNF).”
- Distribution of miRNA expression across human tissues (2016, background): “Likewise, the Human Protein Atlas presents information on proteomes in various tissues (2).”
- Analysis of the Human Tissue-specific Expression by Genome-wide Integration of Transcriptomics and Antibody-based Proteomics* (2013, methodology): “Tissue Profiling—Tissue microarrays (TMA) containing triplicate 1-mm cores of 44 different types of normal tissue and duplicate 1-mm cores of 216 different cancer tissues representing the 20 most common forms of human cancer were generated as previously described (18).”
- New Colors for Histology: Optimized Bivariate Color Maps Increase Perceptual Contrast in Histological Images (2015, methodology): “Folder ‘data’ contains a list of colors used for the color maps, folder ‘image-URLs’ contains all image URLs for ProteinAtlas images and folder ‘sample_images’ contains image files for all remaining images.”
- Hallmarks of cancer: interactions with the tumor stroma. (2010, background): “All images taken from the public database Human Protein Atlas ([72], http://www.”
- Overview of the matrisome--an inventory of extracellular matrix constituents and functions. (2012, background): “…useful databases provide information on the expression and distribution of various ECM proteins (http://www.matrixome.com/ bm/Home/home/home.asp, The Matrixome Project, maintained by Kiyotoshi Sekiguchi and http://www.proteinatlas.org/;Human Protein Atlas) (Ponten et al. 2008; Uhlen et al. 2010).”