The Influenza Virus Resource at the National Center for Biotechnology Information

By Yīmíng Bào, P. Bolotov, D. Dernovoy, B. Kiryutin, L. Zaslavsky, Tatiana A. Tatusova, James Ostell, David J. Lipman. Journal of Virology, 2007

1,029 citations recorded by the source corpus.

Subfields: Agronomy and Crop Science, Epidemiology

View Paper: https://www.semanticscholar.org/paper/1d4913a55eafc91f0a2715c437f7ad28ad59cbfe

How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

In Agronomy and Crop Science

In Epidemiology

Citations in the corpus

Antibody Recognition of the Pandemic H1N1 Influenza Virus Hemagglutinin Receptor Binding Site (2013, methodology): “The full-length and nonredundant influenza A HA sequences were downloaded from the Influenza Virus Resource at the NCBI database (34).”
Structure and Function Analysis of an Antibody Recognizing All Influenza A Subtypes (2016, methodology): “Hemagglutinin sequences analysis and phylogenic tree Hemagglutinin (HA) full-length gene sequences for all subtypes (H1 to H18) were obtained from NCBI Influenza Virus Resource (IVR) database (Bao et al., 2008) and the Global Initiative on Sharing Avian Influenza Database (GISAID) EpiFluTM database ”
NCBI Viral Genomes Resource (2014, background): “These include specialized resources for influenza, dengue and West Nile and other viruses that are part of the Virus Variation Resource (http://www.ncbi.nlm.nih.gov/genome/viruses/variation/) (25, 48, 49) .”
Uniformity of Rotavirus Strain Nomenclature Proposed by the Rotavirus Classification Working Group (RCWG) (2011, positive): “The new RV database will be very similar to the ‘‘Influenza Virus Resource’’, which is widely used to monitor influenza virus strains [10].”
Systematic Identification of H274Y Compensatory Mutations in Influenza A Virus Neuraminidase by High-Throughput Screening (2012, methodology): “a Data were retrieved from the NCBI Influenza Virus Resource on 1 July 2011 (17).”
Multi-state design of flexible proteins predicts sequences optimal for conformational change (2019, methodology): “Even so, a Levene’s test for equality of variances [33] comparing mutation frequency variance within the H3N2 profile generated by RECON MSD to any influenza subtype A HA2 IVR profile indicated no significant difference between mutation frequency variances within the RECON MSD H3N2 profile and any H”
Prevalence of Epistasis in the Evolution of Influenza A Surface Proteins (2011, methodology): “We downloaded all HA and NA coding region sequences of human influenza A virus subtypes H1N1 and H3N2 that were available in the NCBI’s Influenza Virus Resource [85] in June 2010.”
Inferring Stabilizing Mutations from Protein Phylogenies: Application to Influenza Hemagglutinin (2009, background): “For sequence data, we used the full-length hemagglutinin sequences (lab strains excluded) present in the Influenza Virus Resource [101] at the time of our initial analysis (September, 2007).”
The inherent mutational tolerance and antigenic evolvability of influenza hemagglutinin (2014, methodology): “The conserved receptorbinding residues listed in this table are those delineated in the first table of Martin et al. (1998) that also have at least 90% conservation among all naturally occurring H1 HAs in the Influenza Virus Resource (Bao et al., 2008).”