The application of multivariate statistical techniques improves single-wavelength anomalous diffraction phasing.

By Navraj S. Pannu, Randy J. Read. 2004

53 citations recorded by the source corpus.

Subfields: Atomic and Molecular Physics, and Optics, Materials Chemistry, Molecular Biology

How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

In Atomic and Molecular Physics, and Optics

1. Paul D. Adams
2. T. C. Terwilliger
3. Li-Wei Hung
4. G. Bunkoczi
5. Petrus H. Zwart
6. Janet L. Smith
7. D. Akey
8. Gaetano T. Montelione

In Materials Chemistry

1. Randy J. Read
2. Paul D. Adams
3. A. McCoy
4. G. Bunkoczi
5. T. C. Terwilliger
6. G. Murshudov
7. Pavel V. Afonine
8. Martyn D. Winn

In Molecular Biology

1. Randy J. Read
2. Paul D. Adams
3. A. McCoy
4. G. Bunkoczi
5. T. C. Terwilliger
6. Martyn D. Winn
7. G. Murshudov
8. Ronan M. Keegan

Citations in the corpus

• Overview of the CCP4 suite and current developments (2011, methodology): “Heavy-atom substructure detection is performed by AFRO/CRUNCH2 (de Graaff et al., 2001) or by SHELXC/D (Sheldrick, 2008) and initial phasing is carried out by BP3 (Pannu et al., 2003; Pannu & Read, 2004) or SHELXE (Sheldrick, 2008).”
• Phaser crystallographic software (2007, background): “The SAD likelihood function explicitly accounts for the correlations between FþO and F O (McCoy et al., 2004; Pannu & Read, 2004).”
• Can I solve my structure by SAD phasing? Anomalous signal in SAD phasing (2016, methodology): “The substructure and the anomalous differences are then used together to estimate crystallographic phases for the entire structure (Hendrickson & Teeter, 1981; Wang, 1985; Otwinowski, 1991; de La Fortelle & Bricogne, 1997; Furey & Swaminathan, 1997; McCoy et al., 2004; Pannu & Read, 2004).”
• Introduction to phasing (2010, unknown): “(Otwinowski, 1991; de La Fortelle & Bricogne, 1997; Pannu et al., 2003; Pannu & Read, 2004).”
• Improved Technologies Now Routinely Provide Protein NMR Structures Useful for Molecular Replacement (2011, methodology): “There are several ways to address this phase problem, including direct methods (Woolfson, 1971), multiwavelength or single-wavelength anomalous diffraction (MAD or SAD, respectively) (Pahler et al., 1990; Hendrickson, 1991; Pannu and Read, 2004), multiple or single isomorphous replacement (MIR or SI”
• Can I solve my structure by SAD phasing? Planning an experiment, scaling data and evaluating the useful anomalous correlation and anomalous signal (2016, methodology): “…1999; Schneider & Sheldrick, 2002; Grosse-Kunstleve & Adams, 2003) and are then used ISSN 2059-7983 along with the substructure to estimate phases for the entire structure (Otwinowski, 1991; de La Fortelle & Bricogne, 1997; Furey & Swaminathan, 1997; McCoy et al., 2004; Pannu & Read, 2004).”