Sebastian Soyk
Molecular Biology · 2019–2022
A researcher in the Science corpus: 4 papers; trusts 3 researchers and is trusted by 0 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 128 citations into it
Whom Sebastian Soyk trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
Papers from Sebastian Soyk's perspective
Ordered by how strongly the researchers Sebastian Soyk trusts endorse each paper. Same corpus, a different order for every researcher.
- Merqury: reference-free quality, completeness, and phasing assessment for genome assemblies (Genome Biology)
- Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome (Nature Biotechnology)
- Minimap2: pairwise alignment for nucleotide sequences (Bioinform.)
- Versatile and open software for comparing large genomes (Genome Biology)
- A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data (Bioinform.)
- SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing (J. Comput. Biol.)
- STAR: ultrafast universal RNA-seq aligner (Bioinform.)
- Fast gapped-read alignment with Bowtie 2
- HTSeq—a Python framework to work with high-throughput sequencing data (bioRxiv)
- Contiguous and accurate de novo assembly of metazoan genomes with modest long read coverage (bioRxiv)
Their papers
- Automated assembly scaffolding using RagTag elevates a new tomato system for high-throughput genome editing (2022) — 716 citations
- Automated assembly scaffolding elevates a new tomato system for high-throughput genome editing (2021) — 95 citations
- Major impacts of widespread structural variation on gene expression and crop improvement in tomato (2020) — 629 citations
- RaGOO: fast and accurate reference-guided scaffolding of draft genomes (2019) — 586 citations