R. Vilgalys
Molecular Biology · 2000–2016
A researcher in the Science corpus: 17 papers; trusts 3 researchers and is trusted by 21 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 66 citations into it
- Ecology, Evolution, Behavior and Systematics — 27 citations into it; #793 of 6,648 by trust here, #401 by citations
- Genetics — 23 citations into it
- Paleontology — 19 citations into it
- Nature and Landscape Conservation — 8 citations into it
Whom R. Vilgalys trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
Who trusts R. Vilgalys overall
- Noah Fierer
- P. B. Matheny
- K. Treseder
- E. Vellinga
- R. Agerer
- M. Cregger
- C. Lauber
- M. Strickland
- M. Delgado‐Baquerizo
- Leho Tedersoo
Papers from R. Vilgalys's perspective
Ordered by how strongly the researchers R. Vilgalys trusts endorse each paper. Same corpus, a different order for every researcher.
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
- CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.
- Missing data and the design of phylogenetic analyses (Journal of Biomedical Informatics)
- The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.
- QIIME allows analysis of high-throughput community sequencing data (Nature Methods)
- Are tropical fungal endophytes hyperdiverse
- International Code of Nomenclature for algae, fungi, and plants (Melbourne Code)
- Chronic nitrogen enrichment affects the structure and function of the soil microbial community in temperate hardwood and pine forests
- EMBOSS: the European Molecular Biology Open Software Suite.
- PAUP* [Phylogenetic Analysis Using Parsimony (and Other Methods)]
Their papers
- Reconstructing the early evolution of Fungi using a six-gene phylogeny (2006) — 1,796 citations
- Molecular phylogenetics of the Chytridiomycota supports the utility of ultrastructural data in chytrid systematics (2000) — 188 citations
- Major clades of Agaricales: a multilocus phylogenetic overview (2006) — 665 citations
- A phylum-level phylogenetic classification of zygomycete fungi based on genome-scale data (2016) — 1,087 citations
- Independent roles of ectomycorrhizal and saprotrophic communities in soil organic matter decomposition (2013) — 225 citations
- Assessment of Soil Microbial Community Structure by Use of Taxon-Specific Quantitative PCR Assays (2005) — 1,548 citations
- Quantitative analyses of nitrogen cycling genes in soils (2005) — 119 citations
- Fungal Community Analysis by Large-Scale Sequencing of Environmental Samples (2005) — 972 citations
- Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits. (2004) — 821 citations
- Phylogenetic analyses of the Lyophylleae (Agaricales, Basidiomycota) based on nuclear and mitochondrial rDNA sequences (2002) — 106 citations
- Phylogeny of agarics: partial systematics solutions for core omphalinoid genera in the Agaricales (euagarics) (2002) — 84 citations
- Ectomycorrhizal fungi and their leguminous hosts in the Pakaraima Mountains of Guyana (2002) — 125 citations
- One hundred and seventeen clades of euagarics. (2002) — 677 citations
- Coprinus Pers. and the disposition of Coprinus species sensu lato (2001) — 181 citations
- Ribosomal DNA systematics of Ceratobasidium and Thanatephorus with Rhizoctonia anamorphs (2001) — 177 citations
- Phylogenetic analyses and the distribution of nematophagy support a monophyletic Pleurotaceae within the polyphyletic pleurotoid-lentinoid fungi (2000) — 111 citations
- High levels of variation in ribosomal DNA sequences within and among spores of a natural population of the arbuscular mycorrhizal fungus Acaulospora colossica (2000) — 85 citations