Simon Rasmussen
Molecular Biology · 2011–2021
A researcher in the Science corpus: 11 papers; trusts 1 researcher and is trusted by 0 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 132 citations into it
Whom Simon Rasmussen trusts
Their strongest outbound trust, strongest first, inferred from their citations.
- W. James Kent (in Molecular Biology)
Papers from Simon Rasmussen's perspective
Ordered by how strongly the researchers Simon Rasmussen trusts endorse each paper. Same corpus, a different order for every researcher.
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
- The Pfam protein families database
- BLAT--the BLAST-like alignment tool. (Genome Research)
- BIGSdb: Scalable analysis of bacterial genome variation at the population level (BMC Bioinformatics)
- Shifting the genomic gold standard for the prokaryotic species definition (Proceedings of the National Academy of Sciences of the United States of America)
- Notes on the characterization of prokaryote strains for taxonomic purposes. (International Journal of Systematic and Evolutionary Microbiology)
- Characterisation of the Escherichia coli strain associated with an outbreak of haemolytic uraemic syndrome in Germany, 2011: a microbiological study. (Lancet. Infectious Diseases (Print))
- Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure.
- The TIGRFAMs database of protein families (Nucleic Acids Res.)
- DNA-DNA hybridization values and their relationship to whole-genome sequence similarities. (International Journal of Systematic and Evolutionary Microbiology)
Their papers
- Richness of human gut microbiome correlates with metabolic markers (2013) — 4,282 citations
- Upper Palaeolithic Siberian genome reveals dual ancestry of Native Americans (2013) — 859 citations
- Multilocus Sequence Typing of Total-Genome-Sequenced Bacteria (2012) — 2,085 citations
- Improved metagenome binning and assembly using deep variational autoencoders (2021) — 522 citations
- Benchmarking of Methods for Genomic Taxonomy (2014) — 344 citations
- Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage (2019) — 937 citations
- Erratum: Author Correction: 137 ancient human genomes from across the Eurasian steppes (Nature (2018) 557 7705 (369-374)) (2018) — 264 citations
- A genomic history of Aboriginal Australia (2016) — 464 citations
- Population genomics of Bronze Age Eurasia (2015) — 1,383 citations
- Identification of acquired antimicrobial resistance genes (2012) — 4,685 citations
- An Aboriginal Australian Genome Reveals Separate Human Dispersals into Asia (2011) — 746 citations